Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Rnf43Q5NCP0 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC17.89■□□□□ 0.45
Rnf43Q5NCP0 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC17.89■□□□□ 0.45
Rnf43Q5NCP0 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.89■□□□□ 0.45
Rnf43Q5NCP0 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rnf43Q5NCP0 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rnf43Q5NCP0 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rnf43Q5NCP0 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Rnf43Q5NCP0 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rnf43Q5NCP0 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.89■□□□□ 0.45
Rnf43Q5NCP0 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.89■□□□□ 0.45
Rnf43Q5NCP0 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rnf43Q5NCP0 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rnf43Q5NCP0 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rnf43Q5NCP0 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rnf43Q5NCP0 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rnf43Q5NCP0 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rnf43Q5NCP0 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rnf43Q5NCP0 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rnf43Q5NCP0 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rnf43Q5NCP0 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rnf43Q5NCP0 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rnf43Q5NCP0 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rnf43Q5NCP0 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.88■□□□□ 0.45
Rnf43Q5NCP0 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rnf43Q5NCP0 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.88■□□□□ 0.45
Rnf43Q5NCP0 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rnf43Q5NCP0 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.88■□□□□ 0.45
Rnf43Q5NCP0 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rnf43Q5NCP0 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rnf43Q5NCP0 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rnf43Q5NCP0 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Rnf43Q5NCP0 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rnf43Q5NCP0 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Rnf43Q5NCP0 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Rnf43Q5NCP0 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rnf43Q5NCP0 Gm10418-201ENSMUST00000100943 576 ntBASIC17.87■□□□□ 0.45
Rnf43Q5NCP0 Gm7638-201ENSMUST00000121348 967 ntBASIC17.87■□□□□ 0.45
Rnf43Q5NCP0 Gm7284-201ENSMUST00000131667 944 ntBASIC17.87■□□□□ 0.45
Rnf43Q5NCP0 Gm24841-201ENSMUST00000158676 357 ntBASIC17.87■□□□□ 0.45
Rnf43Q5NCP0 Gm7791-201ENSMUST00000219066 539 ntBASIC17.87■□□□□ 0.45
Rnf43Q5NCP0 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Rnf43Q5NCP0 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rnf43Q5NCP0 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rnf43Q5NCP0 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rnf43Q5NCP0 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Rnf43Q5NCP0 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rnf43Q5NCP0 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rnf43Q5NCP0 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rnf43Q5NCP0 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rnf43Q5NCP0 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rnf43Q5NCP0 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.86■□□□□ 0.45
Rnf43Q5NCP0 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rnf43Q5NCP0 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rnf43Q5NCP0 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rnf43Q5NCP0 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
Rnf43Q5NCP0 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rnf43Q5NCP0 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Rnf43Q5NCP0 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rnf43Q5NCP0 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rnf43Q5NCP0 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rnf43Q5NCP0 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rnf43Q5NCP0 Grk6-206ENSMUST00000224995 2971 ntBASIC17.85■□□□□ 0.45
Rnf43Q5NCP0 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rnf43Q5NCP0 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rnf43Q5NCP0 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.85■□□□□ 0.45
Rnf43Q5NCP0 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC17.85■□□□□ 0.45
Rnf43Q5NCP0 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Rnf43Q5NCP0 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rnf43Q5NCP0 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rnf43Q5NCP0 Gm21559-201ENSMUST00000220638 855 ntBASIC17.85■□□□□ 0.45
Rnf43Q5NCP0 Gm8587-201ENSMUST00000076538 843 ntBASIC17.85■□□□□ 0.45
Rnf43Q5NCP0 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rnf43Q5NCP0 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Rnf43Q5NCP0 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rnf43Q5NCP0 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Rnf43Q5NCP0 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rnf43Q5NCP0 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rnf43Q5NCP0 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.84■□□□□ 0.45
Rnf43Q5NCP0 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.84■□□□□ 0.45
Rnf43Q5NCP0 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf43Q5NCP0 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Rnf43Q5NCP0 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Rnf43Q5NCP0 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf43Q5NCP0 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf43Q5NCP0 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf43Q5NCP0 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf43Q5NCP0 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf43Q5NCP0 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf43Q5NCP0 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC17.84■□□□□ 0.45
Rnf43Q5NCP0 Mir1668-201ENSMUST00000184114 107 ntBASIC17.84■□□□□ 0.45
Rnf43Q5NCP0 Gm5587-201ENSMUST00000206270 674 ntBASIC17.84■□□□□ 0.45
Rnf43Q5NCP0 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
Rnf43Q5NCP0 Gm7370-201ENSMUST00000219471 767 ntBASIC17.84■□□□□ 0.45
Rnf43Q5NCP0 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf43Q5NCP0 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf43Q5NCP0 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf43Q5NCP0 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Rnf43Q5NCP0 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf43Q5NCP0 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms