Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scn2bQ56A07 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Scn2bQ56A07 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Scn2bQ56A07 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.42■□□□□ 0.38
Scn2bQ56A07 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scn2bQ56A07 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Scn2bQ56A07 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scn2bQ56A07 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.42■□□□□ 0.38
Scn2bQ56A07 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.42■□□□□ 0.38
Scn2bQ56A07 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scn2bQ56A07 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scn2bQ56A07 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scn2bQ56A07 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Scn2bQ56A07 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Scn2bQ56A07 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Scn2bQ56A07 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scn2bQ56A07 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.41■□□□□ 0.38
Scn2bQ56A07 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scn2bQ56A07 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Scn2bQ56A07 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scn2bQ56A07 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scn2bQ56A07 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Scn2bQ56A07 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scn2bQ56A07 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
Scn2bQ56A07 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Scn2bQ56A07 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.41■□□□□ 0.38
Scn2bQ56A07 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Scn2bQ56A07 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scn2bQ56A07 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Scn2bQ56A07 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.41■□□□□ 0.38
Scn2bQ56A07 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Scn2bQ56A07 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scn2bQ56A07 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scn2bQ56A07 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Scn2bQ56A07 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scn2bQ56A07 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Scn2bQ56A07 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.4■□□□□ 0.38
Scn2bQ56A07 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scn2bQ56A07 Gm13148-201ENSMUST00000118892 745 ntBASIC17.4■□□□□ 0.38
Scn2bQ56A07 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.4■□□□□ 0.38
Scn2bQ56A07 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scn2bQ56A07 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Scn2bQ56A07 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scn2bQ56A07 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scn2bQ56A07 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.4■□□□□ 0.38
Scn2bQ56A07 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.4■□□□□ 0.38
Scn2bQ56A07 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scn2bQ56A07 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Scn2bQ56A07 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.39■□□□□ 0.38
Scn2bQ56A07 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scn2bQ56A07 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scn2bQ56A07 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Scn2bQ56A07 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scn2bQ56A07 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scn2bQ56A07 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scn2bQ56A07 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scn2bQ56A07 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scn2bQ56A07 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scn2bQ56A07 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scn2bQ56A07 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scn2bQ56A07 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scn2bQ56A07 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Scn2bQ56A07 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Scn2bQ56A07 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scn2bQ56A07 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scn2bQ56A07 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scn2bQ56A07 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scn2bQ56A07 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scn2bQ56A07 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scn2bQ56A07 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scn2bQ56A07 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scn2bQ56A07 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scn2bQ56A07 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Scn2bQ56A07 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scn2bQ56A07 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scn2bQ56A07 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Scn2bQ56A07 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scn2bQ56A07 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scn2bQ56A07 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scn2bQ56A07 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Scn2bQ56A07 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scn2bQ56A07 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.38■□□□□ 0.37
Scn2bQ56A07 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scn2bQ56A07 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scn2bQ56A07 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scn2bQ56A07 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scn2bQ56A07 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scn2bQ56A07 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scn2bQ56A07 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scn2bQ56A07 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Scn2bQ56A07 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scn2bQ56A07 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scn2bQ56A07 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scn2bQ56A07 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scn2bQ56A07 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scn2bQ56A07 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scn2bQ56A07 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Scn2bQ56A07 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scn2bQ56A07 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scn2bQ56A07 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms