Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC20.35■□□□□ 0.85
Rc3h1Q4VGL6 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rc3h1Q4VGL6 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Rc3h1Q4VGL6 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rc3h1Q4VGL6 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Rc3h1Q4VGL6 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rc3h1Q4VGL6 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Rc3h1Q4VGL6 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rc3h1Q4VGL6 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Rc3h1Q4VGL6 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rc3h1Q4VGL6 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rc3h1Q4VGL6 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rc3h1Q4VGL6 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rc3h1Q4VGL6 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rc3h1Q4VGL6 Gm7638-201ENSMUST00000121348 967 ntBASIC20.34■□□□□ 0.85
Rc3h1Q4VGL6 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC20.34■□□□□ 0.85
Rc3h1Q4VGL6 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Rc3h1Q4VGL6 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Rc3h1Q4VGL6 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
Rc3h1Q4VGL6 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rc3h1Q4VGL6 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rc3h1Q4VGL6 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rc3h1Q4VGL6 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rc3h1Q4VGL6 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rc3h1Q4VGL6 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rc3h1Q4VGL6 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC20.34■□□□□ 0.85
Rc3h1Q4VGL6 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Rc3h1Q4VGL6 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Rc3h1Q4VGL6 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rc3h1Q4VGL6 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC20.33■□□□□ 0.85
Rc3h1Q4VGL6 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rc3h1Q4VGL6 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC20.33■□□□□ 0.85
Rc3h1Q4VGL6 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC20.33■□□□□ 0.85
Rc3h1Q4VGL6 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC20.33■□□□□ 0.85
Rc3h1Q4VGL6 Gm27463-201ENSMUST00000183569 57 ntBASIC20.33■□□□□ 0.85
Rc3h1Q4VGL6 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rc3h1Q4VGL6 AC159205.6-201ENSMUST00000224935 887 ntBASIC20.33■□□□□ 0.85
Rc3h1Q4VGL6 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rc3h1Q4VGL6 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
Rc3h1Q4VGL6 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Rc3h1Q4VGL6 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rc3h1Q4VGL6 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Rc3h1Q4VGL6 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Rc3h1Q4VGL6 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Rc3h1Q4VGL6 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Rc3h1Q4VGL6 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Rc3h1Q4VGL6 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC20.33■□□□□ 0.84
Rc3h1Q4VGL6 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Rc3h1Q4VGL6 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rc3h1Q4VGL6 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rc3h1Q4VGL6 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Rc3h1Q4VGL6 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Rc3h1Q4VGL6 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rc3h1Q4VGL6 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Rc3h1Q4VGL6 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Rc3h1Q4VGL6 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Rc3h1Q4VGL6 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Rc3h1Q4VGL6 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rc3h1Q4VGL6 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC20.32■□□□□ 0.84
Rc3h1Q4VGL6 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rc3h1Q4VGL6 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Rc3h1Q4VGL6 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rc3h1Q4VGL6 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rc3h1Q4VGL6 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rc3h1Q4VGL6 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Rc3h1Q4VGL6 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rc3h1Q4VGL6 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rc3h1Q4VGL6 AC130671.1-201ENSMUST00000227384 1237 ntBASIC20.31■□□□□ 0.84
Rc3h1Q4VGL6 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rc3h1Q4VGL6 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rc3h1Q4VGL6 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC20.3■□□□□ 0.84
Rc3h1Q4VGL6 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Rc3h1Q4VGL6 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rc3h1Q4VGL6 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Rc3h1Q4VGL6 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Rc3h1Q4VGL6 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rc3h1Q4VGL6 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rc3h1Q4VGL6 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC20.3■□□□□ 0.84
Rc3h1Q4VGL6 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC20.3■□□□□ 0.84
Rc3h1Q4VGL6 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rc3h1Q4VGL6 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Rc3h1Q4VGL6 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rc3h1Q4VGL6 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rc3h1Q4VGL6 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rc3h1Q4VGL6 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rc3h1Q4VGL6 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Rc3h1Q4VGL6 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rc3h1Q4VGL6 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rc3h1Q4VGL6 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rc3h1Q4VGL6 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rc3h1Q4VGL6 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rc3h1Q4VGL6 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
Rc3h1Q4VGL6 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC20.29■□□□□ 0.84
Rc3h1Q4VGL6 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Rc3h1Q4VGL6 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rc3h1Q4VGL6 Gm7791-201ENSMUST00000219066 539 ntBASIC20.29■□□□□ 0.84
Rc3h1Q4VGL6 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rc3h1Q4VGL6 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rc3h1Q4VGL6 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rc3h1Q4VGL6 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms