Protein–RNA interactions for Protein: Q4VA53

Pds5b, Sister chromatid cohesion protein PDS5 homolog B, mousemouse

Known RBP Predictions only

Length 1,446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pds5bQ4VA53 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Pds5bQ4VA53 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC30.79■■■□□ 2.52
Pds5bQ4VA53 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Pds5bQ4VA53 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Pds5bQ4VA53 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC30.78■■■□□ 2.52
Pds5bQ4VA53 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC30.78■■■□□ 2.52
Pds5bQ4VA53 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC30.78■■■□□ 2.52
Pds5bQ4VA53 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC30.78■■■□□ 2.52
Pds5bQ4VA53 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC30.78■■■□□ 2.52
Pds5bQ4VA53 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Pds5bQ4VA53 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
Pds5bQ4VA53 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Pds5bQ4VA53 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC30.78■■■□□ 2.52
Pds5bQ4VA53 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC30.78■■■□□ 2.52
Pds5bQ4VA53 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC30.78■■■□□ 2.52
Pds5bQ4VA53 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Pds5bQ4VA53 Gm20634-201ENSMUST00000090779 2956 ntBASIC30.78■■■□□ 2.52
Pds5bQ4VA53 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Pds5bQ4VA53 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC30.77■■■□□ 2.52
Pds5bQ4VA53 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Pds5bQ4VA53 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Pds5bQ4VA53 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Pds5bQ4VA53 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
Pds5bQ4VA53 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC30.76■■■□□ 2.52
Pds5bQ4VA53 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC30.76■■■□□ 2.51
Pds5bQ4VA53 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
Pds5bQ4VA53 Gm10576-201ENSMUST00000191927 825 ntBASIC30.76■■■□□ 2.51
Pds5bQ4VA53 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
Pds5bQ4VA53 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC30.75■■■□□ 2.51
Pds5bQ4VA53 Gm4995-201ENSMUST00000117247 432 ntBASIC30.75■■■□□ 2.51
Pds5bQ4VA53 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
Pds5bQ4VA53 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC30.75■■■□□ 2.51
Pds5bQ4VA53 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC30.75■■■□□ 2.51
Pds5bQ4VA53 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC30.75■■■□□ 2.51
Pds5bQ4VA53 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC30.75■■■□□ 2.51
Pds5bQ4VA53 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC30.75■■■□□ 2.51
Pds5bQ4VA53 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Pds5bQ4VA53 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC30.75■■■□□ 2.51
Pds5bQ4VA53 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
Pds5bQ4VA53 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC30.75■■■□□ 2.51
Pds5bQ4VA53 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Pds5bQ4VA53 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC30.74■■■□□ 2.51
Pds5bQ4VA53 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
Pds5bQ4VA53 Gm13830-205ENSMUST00000201195 1155 ntBASIC30.74■■■□□ 2.51
Pds5bQ4VA53 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC30.74■■■□□ 2.51
Pds5bQ4VA53 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Pds5bQ4VA53 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC30.74■■■□□ 2.51
Pds5bQ4VA53 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
Pds5bQ4VA53 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC30.74■■■□□ 2.51
Pds5bQ4VA53 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC30.74■■■□□ 2.51
Pds5bQ4VA53 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC30.73■■■□□ 2.51
Pds5bQ4VA53 Gm42670-201ENSMUST00000201816 1292 ntBASIC30.73■■■□□ 2.51
Pds5bQ4VA53 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Pds5bQ4VA53 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC30.73■■■□□ 2.51
Pds5bQ4VA53 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC30.73■■■□□ 2.51
Pds5bQ4VA53 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC30.73■■■□□ 2.51
Pds5bQ4VA53 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC30.73■■■□□ 2.51
Pds5bQ4VA53 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC30.73■■■□□ 2.51
Pds5bQ4VA53 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC30.73■■■□□ 2.51
Pds5bQ4VA53 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC30.73■■■□□ 2.51
Pds5bQ4VA53 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Pds5bQ4VA53 Psmb5-202ENSMUST00000227257 622 ntBASIC30.73■■■□□ 2.51
Pds5bQ4VA53 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC30.73■■■□□ 2.51
Pds5bQ4VA53 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Pds5bQ4VA53 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Pds5bQ4VA53 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
Pds5bQ4VA53 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC30.72■■■□□ 2.51
Pds5bQ4VA53 Gm13042-201ENSMUST00000119244 1955 ntBASIC30.72■■■□□ 2.51
Pds5bQ4VA53 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Pds5bQ4VA53 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC30.72■■■□□ 2.51
Pds5bQ4VA53 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC30.72■■■□□ 2.51
Pds5bQ4VA53 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC30.72■■■□□ 2.51
Pds5bQ4VA53 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
Pds5bQ4VA53 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC30.72■■■□□ 2.51
Pds5bQ4VA53 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Pds5bQ4VA53 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC30.71■■■□□ 2.51
Pds5bQ4VA53 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC30.71■■■□□ 2.51
Pds5bQ4VA53 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
Pds5bQ4VA53 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC30.71■■■□□ 2.51
Pds5bQ4VA53 Cmtm5-203ENSMUST00000227441 610 ntBASIC30.71■■■□□ 2.51
Pds5bQ4VA53 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Pds5bQ4VA53 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC30.71■■■□□ 2.51
Pds5bQ4VA53 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
Pds5bQ4VA53 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
Pds5bQ4VA53 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
Pds5bQ4VA53 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
Pds5bQ4VA53 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
Pds5bQ4VA53 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC30.7■■■□□ 2.51
Pds5bQ4VA53 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC30.7■■■□□ 2.5
Pds5bQ4VA53 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC30.7■■■□□ 2.5
Pds5bQ4VA53 AC160338.1-201ENSMUST00000214232 705 ntBASIC30.7■■■□□ 2.5
Pds5bQ4VA53 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
Pds5bQ4VA53 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC30.7■■■□□ 2.5
Pds5bQ4VA53 Gm32996-201ENSMUST00000199828 1447 ntBASIC30.69■■■□□ 2.5
Pds5bQ4VA53 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC30.69■■■□□ 2.5
Pds5bQ4VA53 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC30.69■■■□□ 2.5
Pds5bQ4VA53 AC153794.1-201ENSMUST00000169148 126 ntBASIC30.69■■■□□ 2.5
Pds5bQ4VA53 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC30.69■■■□□ 2.5
Pds5bQ4VA53 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC30.69■■■□□ 2.5
Pds5bQ4VA53 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms