Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC20.41■□□□□ 0.86
Ddx49Q4FZF3 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ddx49Q4FZF3 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ddx49Q4FZF3 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ddx49Q4FZF3 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ddx49Q4FZF3 Rncr4-201ENSMUST00000194541 2234 ntBASIC20.41■□□□□ 0.86
Ddx49Q4FZF3 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ddx49Q4FZF3 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ddx49Q4FZF3 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ddx49Q4FZF3 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ddx49Q4FZF3 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ddx49Q4FZF3 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ddx49Q4FZF3 Gm9013-201ENSMUST00000132939 882 ntBASIC20.4■□□□□ 0.86
Ddx49Q4FZF3 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ddx49Q4FZF3 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC20.4■□□□□ 0.86
Ddx49Q4FZF3 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ddx49Q4FZF3 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ddx49Q4FZF3 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Ddx49Q4FZF3 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ddx49Q4FZF3 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ddx49Q4FZF3 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Ddx49Q4FZF3 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ddx49Q4FZF3 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC20.39■□□□□ 0.86
Ddx49Q4FZF3 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ddx49Q4FZF3 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ddx49Q4FZF3 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Ddx49Q4FZF3 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Ddx49Q4FZF3 Gm24841-201ENSMUST00000158676 357 ntBASIC20.39■□□□□ 0.85
Ddx49Q4FZF3 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Ddx49Q4FZF3 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ddx49Q4FZF3 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ddx49Q4FZF3 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ddx49Q4FZF3 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ddx49Q4FZF3 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Ddx49Q4FZF3 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ddx49Q4FZF3 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ddx49Q4FZF3 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Ddx49Q4FZF3 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Ddx49Q4FZF3 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ddx49Q4FZF3 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ddx49Q4FZF3 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ddx49Q4FZF3 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Ddx49Q4FZF3 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ddx49Q4FZF3 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ddx49Q4FZF3 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC20.38■□□□□ 0.85
Ddx49Q4FZF3 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC20.38■□□□□ 0.85
Ddx49Q4FZF3 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Ddx49Q4FZF3 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Ddx49Q4FZF3 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ddx49Q4FZF3 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC20.38■□□□□ 0.85
Ddx49Q4FZF3 Gm17808-201ENSMUST00000200859 894 ntBASIC20.38■□□□□ 0.85
Ddx49Q4FZF3 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Ddx49Q4FZF3 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ddx49Q4FZF3 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Ddx49Q4FZF3 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ddx49Q4FZF3 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC20.38■□□□□ 0.85
Ddx49Q4FZF3 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ddx49Q4FZF3 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ddx49Q4FZF3 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Ddx49Q4FZF3 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ddx49Q4FZF3 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ddx49Q4FZF3 Gm37820-201ENSMUST00000194021 2147 ntBASIC20.38■□□□□ 0.85
Ddx49Q4FZF3 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ddx49Q4FZF3 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ddx49Q4FZF3 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ddx49Q4FZF3 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Ddx49Q4FZF3 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ddx49Q4FZF3 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Ddx49Q4FZF3 Mir1668-201ENSMUST00000184114 107 ntBASIC20.37■□□□□ 0.85
Ddx49Q4FZF3 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ddx49Q4FZF3 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Ddx49Q4FZF3 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Ddx49Q4FZF3 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ddx49Q4FZF3 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ddx49Q4FZF3 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ddx49Q4FZF3 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ddx49Q4FZF3 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Ddx49Q4FZF3 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Ddx49Q4FZF3 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC20.36■□□□□ 0.85
Ddx49Q4FZF3 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ddx49Q4FZF3 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ddx49Q4FZF3 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ddx49Q4FZF3 Spsb2-203ENSMUST00000112473 1322 ntBASIC20.36■□□□□ 0.85
Ddx49Q4FZF3 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
Ddx49Q4FZF3 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ddx49Q4FZF3 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Ddx49Q4FZF3 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ddx49Q4FZF3 Gm18669-201ENSMUST00000216049 778 ntBASIC20.36■□□□□ 0.85
Ddx49Q4FZF3 Golph3-205ENSMUST00000228671 2842 ntBASIC20.36■□□□□ 0.85
Ddx49Q4FZF3 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ddx49Q4FZF3 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ddx49Q4FZF3 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ddx49Q4FZF3 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC20.35■□□□□ 0.85
Ddx49Q4FZF3 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ddx49Q4FZF3 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ddx49Q4FZF3 Gm7153-201ENSMUST00000117092 455 ntBASIC20.35■□□□□ 0.85
Ddx49Q4FZF3 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC20.35■□□□□ 0.85
Ddx49Q4FZF3 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ddx49Q4FZF3 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ddx49Q4FZF3 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms