Protein–RNA interactions for Protein: Q3V0K9

Pls1, Plastin-1, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pls1Q3V0K9 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pls1Q3V0K9 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pls1Q3V0K9 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC20.2■□□□□ 0.83
Pls1Q3V0K9 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
Pls1Q3V0K9 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pls1Q3V0K9 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Pls1Q3V0K9 Gm6659-201ENSMUST00000174752 547 ntBASIC20.2■□□□□ 0.82
Pls1Q3V0K9 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pls1Q3V0K9 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pls1Q3V0K9 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pls1Q3V0K9 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Pls1Q3V0K9 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Pls1Q3V0K9 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Pls1Q3V0K9 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Pls1Q3V0K9 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pls1Q3V0K9 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pls1Q3V0K9 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pls1Q3V0K9 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Pls1Q3V0K9 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pls1Q3V0K9 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pls1Q3V0K9 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC20.19■□□□□ 0.82
Pls1Q3V0K9 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pls1Q3V0K9 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Pls1Q3V0K9 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC20.19■□□□□ 0.82
Pls1Q3V0K9 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pls1Q3V0K9 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Pls1Q3V0K9 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pls1Q3V0K9 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Pls1Q3V0K9 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pls1Q3V0K9 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC20.18■□□□□ 0.82
Pls1Q3V0K9 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pls1Q3V0K9 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pls1Q3V0K9 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pls1Q3V0K9 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pls1Q3V0K9 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Pls1Q3V0K9 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Pls1Q3V0K9 Gm13401-201ENSMUST00000117074 291 ntBASIC20.18■□□□□ 0.82
Pls1Q3V0K9 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC20.18■□□□□ 0.82
Pls1Q3V0K9 Gm2274-201ENSMUST00000184539 609 ntBASIC20.18■□□□□ 0.82
Pls1Q3V0K9 Gm45058-201ENSMUST00000205810 766 ntBASIC20.18■□□□□ 0.82
Pls1Q3V0K9 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pls1Q3V0K9 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC20.18■□□□□ 0.82
Pls1Q3V0K9 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pls1Q3V0K9 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Pls1Q3V0K9 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pls1Q3V0K9 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Pls1Q3V0K9 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pls1Q3V0K9 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC20.18■□□□□ 0.82
Pls1Q3V0K9 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Pls1Q3V0K9 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pls1Q3V0K9 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
Pls1Q3V0K9 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC20.18■□□□□ 0.82
Pls1Q3V0K9 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC20.18■□□□□ 0.82
Pls1Q3V0K9 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Pls1Q3V0K9 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC20.18■□□□□ 0.82
Pls1Q3V0K9 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pls1Q3V0K9 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pls1Q3V0K9 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pls1Q3V0K9 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pls1Q3V0K9 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pls1Q3V0K9 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pls1Q3V0K9 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20.17■□□□□ 0.82
Pls1Q3V0K9 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Pls1Q3V0K9 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC20.17■□□□□ 0.82
Pls1Q3V0K9 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC20.17■□□□□ 0.82
Pls1Q3V0K9 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC20.17■□□□□ 0.82
Pls1Q3V0K9 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Pls1Q3V0K9 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Pls1Q3V0K9 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Pls1Q3V0K9 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pls1Q3V0K9 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pls1Q3V0K9 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pls1Q3V0K9 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pls1Q3V0K9 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pls1Q3V0K9 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pls1Q3V0K9 AC122335.2-201ENSMUST00000213901 6181 ntBASIC20.16■□□□□ 0.82
Pls1Q3V0K9 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pls1Q3V0K9 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pls1Q3V0K9 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Pls1Q3V0K9 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pls1Q3V0K9 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC20.16■□□□□ 0.82
Pls1Q3V0K9 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pls1Q3V0K9 Mir5130-201ENSMUST00000175160 84 ntBASIC20.16■□□□□ 0.82
Pls1Q3V0K9 Gm29791-202ENSMUST00000207888 369 ntBASIC20.16■□□□□ 0.82
Pls1Q3V0K9 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pls1Q3V0K9 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pls1Q3V0K9 Gm43213-201ENSMUST00000151866 1790 ntBASIC20.16■□□□□ 0.82
Pls1Q3V0K9 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pls1Q3V0K9 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pls1Q3V0K9 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC20.15■□□□□ 0.82
Pls1Q3V0K9 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pls1Q3V0K9 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Pls1Q3V0K9 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Pls1Q3V0K9 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pls1Q3V0K9 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Pls1Q3V0K9 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pls1Q3V0K9 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pls1Q3V0K9 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pls1Q3V0K9 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Pls1Q3V0K9 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms