Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim80Q3V061 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim80Q3V061 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim80Q3V061 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim80Q3V061 Gm20760-201ENSMUST00000179197 648 ntBASIC18.15■□□□□ 0.5
Trim80Q3V061 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
Trim80Q3V061 Gm4968-201ENSMUST00000071458 858 ntBASIC18.15■□□□□ 0.5
Trim80Q3V061 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim80Q3V061 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Trim80Q3V061 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim80Q3V061 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim80Q3V061 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Trim80Q3V061 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim80Q3V061 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trim80Q3V061 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Trim80Q3V061 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Trim80Q3V061 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
Trim80Q3V061 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
Trim80Q3V061 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim80Q3V061 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim80Q3V061 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trim80Q3V061 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim80Q3V061 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim80Q3V061 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim80Q3V061 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim80Q3V061 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trim80Q3V061 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Trim80Q3V061 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim80Q3V061 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim80Q3V061 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trim80Q3V061 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Trim80Q3V061 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim80Q3V061 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim80Q3V061 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim80Q3V061 Gm15743-202ENSMUST00000182690 1901 ntBASIC18.13■□□□□ 0.49
Trim80Q3V061 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim80Q3V061 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Trim80Q3V061 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim80Q3V061 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim80Q3V061 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim80Q3V061 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
Trim80Q3V061 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Trim80Q3V061 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC18.13■□□□□ 0.49
Trim80Q3V061 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.13■□□□□ 0.49
Trim80Q3V061 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.13■□□□□ 0.49
Trim80Q3V061 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim80Q3V061 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim80Q3V061 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim80Q3V061 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Trim80Q3V061 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trim80Q3V061 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim80Q3V061 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim80Q3V061 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trim80Q3V061 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim80Q3V061 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim80Q3V061 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trim80Q3V061 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Trim80Q3V061 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim80Q3V061 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trim80Q3V061 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC18.12■□□□□ 0.49
Trim80Q3V061 Gm7290-201ENSMUST00000104990 617 ntBASIC18.12■□□□□ 0.49
Trim80Q3V061 Gm12918-201ENSMUST00000120234 636 ntBASIC18.12■□□□□ 0.49
Trim80Q3V061 Gm15710-201ENSMUST00000121821 636 ntBASIC18.12■□□□□ 0.49
Trim80Q3V061 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Trim80Q3V061 Gm5075-201ENSMUST00000196916 622 ntBASIC18.12■□□□□ 0.49
Trim80Q3V061 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.12■□□□□ 0.49
Trim80Q3V061 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.12■□□□□ 0.49
Trim80Q3V061 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim80Q3V061 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.12■□□□□ 0.49
Trim80Q3V061 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim80Q3V061 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim80Q3V061 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim80Q3V061 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trim80Q3V061 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim80Q3V061 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim80Q3V061 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim80Q3V061 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trim80Q3V061 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim80Q3V061 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim80Q3V061 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim80Q3V061 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim80Q3V061 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trim80Q3V061 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Trim80Q3V061 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Trim80Q3V061 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim80Q3V061 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim80Q3V061 AC154231.1-201ENSMUST00000220564 2175 ntBASIC18.11■□□□□ 0.49
Trim80Q3V061 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trim80Q3V061 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim80Q3V061 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim80Q3V061 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Trim80Q3V061 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim80Q3V061 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Trim80Q3V061 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Trim80Q3V061 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.1■□□□□ 0.49
Trim80Q3V061 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Trim80Q3V061 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim80Q3V061 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim80Q3V061 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
Trim80Q3V061 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms