Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Cdkl5Q3UTQ8 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC20.4■□□□□ 0.86
Cdkl5Q3UTQ8 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC20.4■□□□□ 0.86
Cdkl5Q3UTQ8 CT025689.6-201ENSMUST00000224991 1104 ntBASIC20.4■□□□□ 0.86
Cdkl5Q3UTQ8 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cdkl5Q3UTQ8 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cdkl5Q3UTQ8 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cdkl5Q3UTQ8 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cdkl5Q3UTQ8 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
Cdkl5Q3UTQ8 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cdkl5Q3UTQ8 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC20.4■□□□□ 0.86
Cdkl5Q3UTQ8 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cdkl5Q3UTQ8 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Cdkl5Q3UTQ8 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cdkl5Q3UTQ8 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cdkl5Q3UTQ8 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cdkl5Q3UTQ8 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cdkl5Q3UTQ8 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
Cdkl5Q3UTQ8 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cdkl5Q3UTQ8 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cdkl5Q3UTQ8 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Cdkl5Q3UTQ8 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC20.39■□□□□ 0.85
Cdkl5Q3UTQ8 Mir8112-201ENSMUST00000184382 131 ntBASIC20.39■□□□□ 0.85
Cdkl5Q3UTQ8 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.85
Cdkl5Q3UTQ8 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Cdkl5Q3UTQ8 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cdkl5Q3UTQ8 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cdkl5Q3UTQ8 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Cdkl5Q3UTQ8 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cdkl5Q3UTQ8 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC20.39■□□□□ 0.85
Cdkl5Q3UTQ8 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cdkl5Q3UTQ8 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cdkl5Q3UTQ8 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC20.39■□□□□ 0.85
Cdkl5Q3UTQ8 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Cdkl5Q3UTQ8 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cdkl5Q3UTQ8 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cdkl5Q3UTQ8 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Cdkl5Q3UTQ8 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cdkl5Q3UTQ8 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Cdkl5Q3UTQ8 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Cdkl5Q3UTQ8 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Cdkl5Q3UTQ8 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC20.38■□□□□ 0.85
Cdkl5Q3UTQ8 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Cdkl5Q3UTQ8 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Cdkl5Q3UTQ8 Gm13401-201ENSMUST00000117074 291 ntBASIC20.38■□□□□ 0.85
Cdkl5Q3UTQ8 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Cdkl5Q3UTQ8 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cdkl5Q3UTQ8 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cdkl5Q3UTQ8 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC20.38■□□□□ 0.85
Cdkl5Q3UTQ8 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cdkl5Q3UTQ8 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cdkl5Q3UTQ8 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cdkl5Q3UTQ8 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cdkl5Q3UTQ8 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cdkl5Q3UTQ8 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cdkl5Q3UTQ8 Gm44878-201ENSMUST00000205812 1295 ntBASIC20.37■□□□□ 0.85
Cdkl5Q3UTQ8 AC135637.1-201ENSMUST00000227750 365 ntBASIC20.37■□□□□ 0.85
Cdkl5Q3UTQ8 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Cdkl5Q3UTQ8 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC20.37■□□□□ 0.85
Cdkl5Q3UTQ8 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cdkl5Q3UTQ8 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC20.37■□□□□ 0.85
Cdkl5Q3UTQ8 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Cdkl5Q3UTQ8 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cdkl5Q3UTQ8 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cdkl5Q3UTQ8 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cdkl5Q3UTQ8 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cdkl5Q3UTQ8 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cdkl5Q3UTQ8 Gm37194-201ENSMUST00000193092 3031 ntBASIC20.36■□□□□ 0.85
Cdkl5Q3UTQ8 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Cdkl5Q3UTQ8 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC20.36■□□□□ 0.85
Cdkl5Q3UTQ8 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cdkl5Q3UTQ8 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Cdkl5Q3UTQ8 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cdkl5Q3UTQ8 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC20.36■□□□□ 0.85
Cdkl5Q3UTQ8 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cdkl5Q3UTQ8 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Cdkl5Q3UTQ8 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cdkl5Q3UTQ8 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC20.36■□□□□ 0.85
Cdkl5Q3UTQ8 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Cdkl5Q3UTQ8 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cdkl5Q3UTQ8 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cdkl5Q3UTQ8 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cdkl5Q3UTQ8 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC20.35■□□□□ 0.85
Cdkl5Q3UTQ8 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cdkl5Q3UTQ8 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC20.35■□□□□ 0.85
Cdkl5Q3UTQ8 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cdkl5Q3UTQ8 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cdkl5Q3UTQ8 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC20.35■□□□□ 0.85
Cdkl5Q3UTQ8 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC20.35■□□□□ 0.85
Cdkl5Q3UTQ8 Gm18025-201ENSMUST00000221733 862 ntBASIC20.35■□□□□ 0.85
Cdkl5Q3UTQ8 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cdkl5Q3UTQ8 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cdkl5Q3UTQ8 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cdkl5Q3UTQ8 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cdkl5Q3UTQ8 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cdkl5Q3UTQ8 Gm43702-201ENSMUST00000198772 2546 ntBASIC20.34■□□□□ 0.85
Cdkl5Q3UTQ8 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cdkl5Q3UTQ8 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Cdkl5Q3UTQ8 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC20.34■□□□□ 0.85
Cdkl5Q3UTQ8 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC20.34■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms