Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
Nlrc4Q3UP24 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Nlrc4Q3UP24 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nlrc4Q3UP24 Gm4974-201ENSMUST00000209974 875 ntBASIC18.51■□□□□ 0.55
Nlrc4Q3UP24 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nlrc4Q3UP24 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Nlrc4Q3UP24 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Nlrc4Q3UP24 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Nlrc4Q3UP24 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Nlrc4Q3UP24 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.5■□□□□ 0.55
Nlrc4Q3UP24 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nlrc4Q3UP24 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nlrc4Q3UP24 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nlrc4Q3UP24 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nlrc4Q3UP24 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Nlrc4Q3UP24 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.5■□□□□ 0.55
Nlrc4Q3UP24 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.5■□□□□ 0.55
Nlrc4Q3UP24 Mir5122-201ENSMUST00000175004 89 ntBASIC18.5■□□□□ 0.55
Nlrc4Q3UP24 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nlrc4Q3UP24 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nlrc4Q3UP24 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nlrc4Q3UP24 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.5■□□□□ 0.55
Nlrc4Q3UP24 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nlrc4Q3UP24 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nlrc4Q3UP24 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nlrc4Q3UP24 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nlrc4Q3UP24 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nlrc4Q3UP24 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nlrc4Q3UP24 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nlrc4Q3UP24 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nlrc4Q3UP24 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nlrc4Q3UP24 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nlrc4Q3UP24 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Nlrc4Q3UP24 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC18.49■□□□□ 0.55
Nlrc4Q3UP24 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.49■□□□□ 0.55
Nlrc4Q3UP24 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.49■□□□□ 0.55
Nlrc4Q3UP24 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC18.49■□□□□ 0.55
Nlrc4Q3UP24 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.49■□□□□ 0.55
Nlrc4Q3UP24 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Nlrc4Q3UP24 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Nlrc4Q3UP24 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Nlrc4Q3UP24 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nlrc4Q3UP24 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nlrc4Q3UP24 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nlrc4Q3UP24 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Nlrc4Q3UP24 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nlrc4Q3UP24 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Nlrc4Q3UP24 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Nlrc4Q3UP24 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Nlrc4Q3UP24 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nlrc4Q3UP24 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Nlrc4Q3UP24 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nlrc4Q3UP24 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nlrc4Q3UP24 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC18.48■□□□□ 0.55
Nlrc4Q3UP24 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.48■□□□□ 0.55
Nlrc4Q3UP24 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Nlrc4Q3UP24 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nlrc4Q3UP24 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
Nlrc4Q3UP24 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.48■□□□□ 0.55
Nlrc4Q3UP24 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nlrc4Q3UP24 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nlrc4Q3UP24 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.48■□□□□ 0.55
Nlrc4Q3UP24 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nlrc4Q3UP24 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Nlrc4Q3UP24 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Nlrc4Q3UP24 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nlrc4Q3UP24 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nlrc4Q3UP24 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Nlrc4Q3UP24 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nlrc4Q3UP24 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nlrc4Q3UP24 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nlrc4Q3UP24 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Nlrc4Q3UP24 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Nlrc4Q3UP24 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nlrc4Q3UP24 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.47■□□□□ 0.55
Nlrc4Q3UP24 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Nlrc4Q3UP24 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nlrc4Q3UP24 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.47■□□□□ 0.55
Nlrc4Q3UP24 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Nlrc4Q3UP24 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.47■□□□□ 0.55
Nlrc4Q3UP24 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.47■□□□□ 0.55
Nlrc4Q3UP24 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.47■□□□□ 0.55
Nlrc4Q3UP24 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Nlrc4Q3UP24 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Nlrc4Q3UP24 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nlrc4Q3UP24 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nlrc4Q3UP24 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nlrc4Q3UP24 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.47■□□□□ 0.55
Nlrc4Q3UP24 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nlrc4Q3UP24 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Nlrc4Q3UP24 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.46■□□□□ 0.55
Nlrc4Q3UP24 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nlrc4Q3UP24 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC18.46■□□□□ 0.55
Nlrc4Q3UP24 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Nlrc4Q3UP24 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Nlrc4Q3UP24 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nlrc4Q3UP24 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC18.46■□□□□ 0.55
Nlrc4Q3UP24 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Nlrc4Q3UP24 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC18.46■□□□□ 0.55
Nlrc4Q3UP24 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.46■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms