Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cks1brtQ3UNC9 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cks1brtQ3UNC9 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cks1brtQ3UNC9 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Cks1brtQ3UNC9 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cks1brtQ3UNC9 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cks1brtQ3UNC9 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cks1brtQ3UNC9 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cks1brtQ3UNC9 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Cks1brtQ3UNC9 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cks1brtQ3UNC9 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC12.75□□□□□ -0.37
Cks1brtQ3UNC9 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cks1brtQ3UNC9 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cks1brtQ3UNC9 Gm6085-201ENSMUST00000182774 1470 ntBASIC12.75□□□□□ -0.37
Cks1brtQ3UNC9 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cks1brtQ3UNC9 Gm45774-201ENSMUST00000211992 2665 ntBASIC12.75□□□□□ -0.37
Cks1brtQ3UNC9 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cks1brtQ3UNC9 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cks1brtQ3UNC9 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cks1brtQ3UNC9 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cks1brtQ3UNC9 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cks1brtQ3UNC9 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cks1brtQ3UNC9 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cks1brtQ3UNC9 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cks1brtQ3UNC9 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Cks1brtQ3UNC9 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cks1brtQ3UNC9 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Cks1brtQ3UNC9 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Cks1brtQ3UNC9 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cks1brtQ3UNC9 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Cks1brtQ3UNC9 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cks1brtQ3UNC9 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Cks1brtQ3UNC9 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Cks1brtQ3UNC9 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Cks1brtQ3UNC9 Gm27045-201ENSMUST00000182145 1402 ntBASIC12.74□□□□□ -0.37
Cks1brtQ3UNC9 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cks1brtQ3UNC9 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cks1brtQ3UNC9 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cks1brtQ3UNC9 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC12.74□□□□□ -0.37
Cks1brtQ3UNC9 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC12.74□□□□□ -0.37
Cks1brtQ3UNC9 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cks1brtQ3UNC9 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cks1brtQ3UNC9 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC12.74□□□□□ -0.37
Cks1brtQ3UNC9 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cks1brtQ3UNC9 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cks1brtQ3UNC9 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cks1brtQ3UNC9 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cks1brtQ3UNC9 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cks1brtQ3UNC9 Gm43808-201ENSMUST00000202534 2065 ntBASIC12.73□□□□□ -0.37
Cks1brtQ3UNC9 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Cks1brtQ3UNC9 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cks1brtQ3UNC9 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Cks1brtQ3UNC9 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cks1brtQ3UNC9 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cks1brtQ3UNC9 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cks1brtQ3UNC9 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cks1brtQ3UNC9 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cks1brtQ3UNC9 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cks1brtQ3UNC9 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cks1brtQ3UNC9 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Cks1brtQ3UNC9 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cks1brtQ3UNC9 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Cks1brtQ3UNC9 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Cks1brtQ3UNC9 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC12.73□□□□□ -0.37
Cks1brtQ3UNC9 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cks1brtQ3UNC9 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cks1brtQ3UNC9 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cks1brtQ3UNC9 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Cks1brtQ3UNC9 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cks1brtQ3UNC9 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cks1brtQ3UNC9 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Cks1brtQ3UNC9 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cks1brtQ3UNC9 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Cks1brtQ3UNC9 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC12.72□□□□□ -0.37
Cks1brtQ3UNC9 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Cks1brtQ3UNC9 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cks1brtQ3UNC9 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cks1brtQ3UNC9 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cks1brtQ3UNC9 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cks1brtQ3UNC9 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Cks1brtQ3UNC9 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cks1brtQ3UNC9 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cks1brtQ3UNC9 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cks1brtQ3UNC9 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Cks1brtQ3UNC9 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cks1brtQ3UNC9 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cks1brtQ3UNC9 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Cks1brtQ3UNC9 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cks1brtQ3UNC9 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC12.72□□□□□ -0.37
Cks1brtQ3UNC9 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cks1brtQ3UNC9 Gm10657-201ENSMUST00000193528 1031 ntBASIC12.72□□□□□ -0.37
Cks1brtQ3UNC9 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC12.72□□□□□ -0.37
Cks1brtQ3UNC9 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC12.72□□□□□ -0.37
Cks1brtQ3UNC9 Nsd1-203ENSMUST00000224156 1149 ntBASIC12.72□□□□□ -0.37
Cks1brtQ3UNC9 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cks1brtQ3UNC9 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Cks1brtQ3UNC9 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cks1brtQ3UNC9 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cks1brtQ3UNC9 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cks1brtQ3UNC9 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms