Protein–RNA interactions for Protein: Q3ULW6

Ccdc33, Coiled-coil domain-containing protein 33, mousemouse

Predictions only

Length 985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc33Q3ULW6 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc33Q3ULW6 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc33Q3ULW6 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Ccdc33Q3ULW6 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc33Q3ULW6 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc33Q3ULW6 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.66■□□□□ 0.74
Ccdc33Q3ULW6 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc33Q3ULW6 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Ccdc33Q3ULW6 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc33Q3ULW6 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Ccdc33Q3ULW6 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc33Q3ULW6 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc33Q3ULW6 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc33Q3ULW6 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc33Q3ULW6 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc33Q3ULW6 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Ccdc33Q3ULW6 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Ccdc33Q3ULW6 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc33Q3ULW6 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc33Q3ULW6 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc33Q3ULW6 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Ccdc33Q3ULW6 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc33Q3ULW6 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc33Q3ULW6 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc33Q3ULW6 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC19.65■□□□□ 0.74
Ccdc33Q3ULW6 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc33Q3ULW6 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ccdc33Q3ULW6 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Ccdc33Q3ULW6 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc33Q3ULW6 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc33Q3ULW6 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc33Q3ULW6 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC19.64■□□□□ 0.73
Ccdc33Q3ULW6 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc33Q3ULW6 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Ccdc33Q3ULW6 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc33Q3ULW6 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc33Q3ULW6 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc33Q3ULW6 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.64■□□□□ 0.73
Ccdc33Q3ULW6 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc33Q3ULW6 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc33Q3ULW6 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc33Q3ULW6 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
Ccdc33Q3ULW6 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Ccdc33Q3ULW6 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc33Q3ULW6 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
Ccdc33Q3ULW6 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc33Q3ULW6 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc33Q3ULW6 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc33Q3ULW6 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc33Q3ULW6 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc33Q3ULW6 Gm17971-201ENSMUST00000190239 806 ntBASIC19.63■□□□□ 0.73
Ccdc33Q3ULW6 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc33Q3ULW6 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Ccdc33Q3ULW6 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Ccdc33Q3ULW6 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc33Q3ULW6 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Ccdc33Q3ULW6 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc33Q3ULW6 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.63■□□□□ 0.73
Ccdc33Q3ULW6 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc33Q3ULW6 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.63■□□□□ 0.73
Ccdc33Q3ULW6 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc33Q3ULW6 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc33Q3ULW6 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc33Q3ULW6 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc33Q3ULW6 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Ccdc33Q3ULW6 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc33Q3ULW6 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Ccdc33Q3ULW6 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC19.62■□□□□ 0.73
Ccdc33Q3ULW6 Gm17661-201ENSMUST00000170317 270 ntBASIC19.62■□□□□ 0.73
Ccdc33Q3ULW6 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc33Q3ULW6 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc33Q3ULW6 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc33Q3ULW6 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc33Q3ULW6 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc33Q3ULW6 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc33Q3ULW6 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc33Q3ULW6 Gm10654-201ENSMUST00000098653 1633 ntBASIC19.62■□□□□ 0.73
Ccdc33Q3ULW6 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc33Q3ULW6 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc33Q3ULW6 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc33Q3ULW6 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc33Q3ULW6 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Ccdc33Q3ULW6 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
Ccdc33Q3ULW6 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc33Q3ULW6 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc33Q3ULW6 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc33Q3ULW6 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc33Q3ULW6 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc33Q3ULW6 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc33Q3ULW6 Gm42939-201ENSMUST00000197514 2205 ntBASIC19.61■□□□□ 0.73
Ccdc33Q3ULW6 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc33Q3ULW6 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc33Q3ULW6 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc33Q3ULW6 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Ccdc33Q3ULW6 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc33Q3ULW6 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Ccdc33Q3ULW6 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc33Q3ULW6 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc33Q3ULW6 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc33Q3ULW6 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms