Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC16.28■□□□□ 0.2
Spg11Q3UHA3 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Spg11Q3UHA3 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Spg11Q3UHA3 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Spg11Q3UHA3 AC126028.2-201ENSMUST00000228100 1833 ntBASIC16.28■□□□□ 0.2
Spg11Q3UHA3 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Spg11Q3UHA3 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Spg11Q3UHA3 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Spg11Q3UHA3 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC16.27■□□□□ 0.2
Spg11Q3UHA3 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Spg11Q3UHA3 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Spg11Q3UHA3 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
Spg11Q3UHA3 Gm5648-201ENSMUST00000122244 1587 ntBASIC16.27■□□□□ 0.2
Spg11Q3UHA3 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Spg11Q3UHA3 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Spg11Q3UHA3 Dmtn-209ENSMUST00000228295 2572 ntBASIC16.27■□□□□ 0.19
Spg11Q3UHA3 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC16.27■□□□□ 0.19
Spg11Q3UHA3 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Spg11Q3UHA3 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Spg11Q3UHA3 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Spg11Q3UHA3 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Spg11Q3UHA3 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Spg11Q3UHA3 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Spg11Q3UHA3 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Spg11Q3UHA3 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Spg11Q3UHA3 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
Spg11Q3UHA3 Gm27397-201ENSMUST00000184997 107 ntBASIC16.26■□□□□ 0.19
Spg11Q3UHA3 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Spg11Q3UHA3 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Spg11Q3UHA3 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Spg11Q3UHA3 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Spg11Q3UHA3 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Spg11Q3UHA3 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Spg11Q3UHA3 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Spg11Q3UHA3 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC16.25■□□□□ 0.19
Spg11Q3UHA3 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
Spg11Q3UHA3 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC16.25■□□□□ 0.19
Spg11Q3UHA3 Gm26308-201ENSMUST00000157768 69 ntBASIC16.25■□□□□ 0.19
Spg11Q3UHA3 Gm6296-201ENSMUST00000222599 943 ntBASIC16.25■□□□□ 0.19
Spg11Q3UHA3 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Spg11Q3UHA3 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Spg11Q3UHA3 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Spg11Q3UHA3 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Spg11Q3UHA3 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Spg11Q3UHA3 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Spg11Q3UHA3 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Spg11Q3UHA3 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC16.25■□□□□ 0.19
Spg11Q3UHA3 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.25■□□□□ 0.19
Spg11Q3UHA3 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Spg11Q3UHA3 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Spg11Q3UHA3 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Spg11Q3UHA3 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Spg11Q3UHA3 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Spg11Q3UHA3 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Spg11Q3UHA3 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Spg11Q3UHA3 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Spg11Q3UHA3 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Spg11Q3UHA3 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Spg11Q3UHA3 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Spg11Q3UHA3 AC151286.1-201ENSMUST00000198489 145 ntBASIC16.24■□□□□ 0.19
Spg11Q3UHA3 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC16.24■□□□□ 0.19
Spg11Q3UHA3 AC225888.1-201ENSMUST00000227184 728 ntBASIC16.24■□□□□ 0.19
Spg11Q3UHA3 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Spg11Q3UHA3 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Spg11Q3UHA3 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Spg11Q3UHA3 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Spg11Q3UHA3 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Spg11Q3UHA3 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Spg11Q3UHA3 Gm25911-201ENSMUST00000157621 56 ntBASIC16.24■□□□□ 0.19
Spg11Q3UHA3 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC16.24■□□□□ 0.19
Spg11Q3UHA3 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Spg11Q3UHA3 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Spg11Q3UHA3 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Spg11Q3UHA3 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Spg11Q3UHA3 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Spg11Q3UHA3 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC16.23■□□□□ 0.19
Spg11Q3UHA3 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Spg11Q3UHA3 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Spg11Q3UHA3 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Spg11Q3UHA3 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC16.23■□□□□ 0.19
Spg11Q3UHA3 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Spg11Q3UHA3 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Spg11Q3UHA3 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Spg11Q3UHA3 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Spg11Q3UHA3 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Spg11Q3UHA3 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Spg11Q3UHA3 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Spg11Q3UHA3 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC16.22■□□□□ 0.19
Spg11Q3UHA3 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Spg11Q3UHA3 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Spg11Q3UHA3 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Spg11Q3UHA3 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC16.22■□□□□ 0.19
Spg11Q3UHA3 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Spg11Q3UHA3 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Spg11Q3UHA3 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Spg11Q3UHA3 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Spg11Q3UHA3 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC16.22■□□□□ 0.19
Spg11Q3UHA3 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Spg11Q3UHA3 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Spg11Q3UHA3 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms