Protein–RNA interactions for Protein: Q3UFY4

Rsph3a, Radial spoke head protein 3 homolog A, mousemouse

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph3aQ3UFY4 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rsph3aQ3UFY4 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rsph3aQ3UFY4 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC21.12■□□□□ 0.97
Rsph3aQ3UFY4 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rsph3aQ3UFY4 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
Rsph3aQ3UFY4 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Rsph3aQ3UFY4 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Rsph3aQ3UFY4 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rsph3aQ3UFY4 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC21.11■□□□□ 0.97
Rsph3aQ3UFY4 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rsph3aQ3UFY4 AC160393.1-201ENSMUST00000218378 1279 ntBASIC21.11■□□□□ 0.97
Rsph3aQ3UFY4 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Rsph3aQ3UFY4 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rsph3aQ3UFY4 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rsph3aQ3UFY4 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rsph3aQ3UFY4 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Rsph3aQ3UFY4 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rsph3aQ3UFY4 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Rsph3aQ3UFY4 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rsph3aQ3UFY4 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC21.1■□□□□ 0.97
Rsph3aQ3UFY4 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rsph3aQ3UFY4 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rsph3aQ3UFY4 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Rsph3aQ3UFY4 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rsph3aQ3UFY4 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rsph3aQ3UFY4 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rsph3aQ3UFY4 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rsph3aQ3UFY4 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rsph3aQ3UFY4 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rsph3aQ3UFY4 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rsph3aQ3UFY4 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rsph3aQ3UFY4 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rsph3aQ3UFY4 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rsph3aQ3UFY4 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Rsph3aQ3UFY4 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Rsph3aQ3UFY4 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rsph3aQ3UFY4 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Rsph3aQ3UFY4 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rsph3aQ3UFY4 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Rsph3aQ3UFY4 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC21.08■□□□□ 0.97
Rsph3aQ3UFY4 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.97
Rsph3aQ3UFY4 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rsph3aQ3UFY4 Gm12933-201ENSMUST00000120203 872 ntBASIC21.08■□□□□ 0.97
Rsph3aQ3UFY4 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Rsph3aQ3UFY4 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC21.08■□□□□ 0.96
Rsph3aQ3UFY4 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Rsph3aQ3UFY4 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Rsph3aQ3UFY4 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC21.07■□□□□ 0.96
Rsph3aQ3UFY4 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rsph3aQ3UFY4 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rsph3aQ3UFY4 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rsph3aQ3UFY4 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC21.07■□□□□ 0.96
Rsph3aQ3UFY4 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC21.07■□□□□ 0.96
Rsph3aQ3UFY4 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rsph3aQ3UFY4 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rsph3aQ3UFY4 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Rsph3aQ3UFY4 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rsph3aQ3UFY4 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rsph3aQ3UFY4 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Rsph3aQ3UFY4 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rsph3aQ3UFY4 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rsph3aQ3UFY4 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rsph3aQ3UFY4 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Rsph3aQ3UFY4 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC21.06■□□□□ 0.96
Rsph3aQ3UFY4 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Rsph3aQ3UFY4 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rsph3aQ3UFY4 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rsph3aQ3UFY4 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC21.06■□□□□ 0.96
Rsph3aQ3UFY4 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Rsph3aQ3UFY4 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rsph3aQ3UFY4 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC21.06■□□□□ 0.96
Rsph3aQ3UFY4 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC21.06■□□□□ 0.96
Rsph3aQ3UFY4 CT025689.6-201ENSMUST00000224991 1104 ntBASIC21.06■□□□□ 0.96
Rsph3aQ3UFY4 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
Rsph3aQ3UFY4 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rsph3aQ3UFY4 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rsph3aQ3UFY4 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rsph3aQ3UFY4 Gm45412-201ENSMUST00000210217 2275 ntBASIC21.06■□□□□ 0.96
Rsph3aQ3UFY4 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rsph3aQ3UFY4 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rsph3aQ3UFY4 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rsph3aQ3UFY4 Gm37563-201ENSMUST00000192580 1513 ntBASIC21.05■□□□□ 0.96
Rsph3aQ3UFY4 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Rsph3aQ3UFY4 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rsph3aQ3UFY4 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rsph3aQ3UFY4 Gm22325-201ENSMUST00000158904 308 ntBASIC21.05■□□□□ 0.96
Rsph3aQ3UFY4 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC21.05■□□□□ 0.96
Rsph3aQ3UFY4 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC21.05■□□□□ 0.96
Rsph3aQ3UFY4 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rsph3aQ3UFY4 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rsph3aQ3UFY4 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rsph3aQ3UFY4 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rsph3aQ3UFY4 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC21.05■□□□□ 0.96
Rsph3aQ3UFY4 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rsph3aQ3UFY4 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rsph3aQ3UFY4 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rsph3aQ3UFY4 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rsph3aQ3UFY4 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC21.04■□□□□ 0.96
Rsph3aQ3UFY4 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Rsph3aQ3UFY4 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 10.7 ms