Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nhej1Q3KNJ2 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nhej1Q3KNJ2 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nhej1Q3KNJ2 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nhej1Q3KNJ2 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nhej1Q3KNJ2 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nhej1Q3KNJ2 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nhej1Q3KNJ2 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.77■□□□□ 0.6
Nhej1Q3KNJ2 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Nhej1Q3KNJ2 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
Nhej1Q3KNJ2 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.77■□□□□ 0.6
Nhej1Q3KNJ2 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.77■□□□□ 0.6
Nhej1Q3KNJ2 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.77■□□□□ 0.6
Nhej1Q3KNJ2 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nhej1Q3KNJ2 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nhej1Q3KNJ2 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC18.77■□□□□ 0.6
Nhej1Q3KNJ2 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.77■□□□□ 0.6
Nhej1Q3KNJ2 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Nhej1Q3KNJ2 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Nhej1Q3KNJ2 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Nhej1Q3KNJ2 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Nhej1Q3KNJ2 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Nhej1Q3KNJ2 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nhej1Q3KNJ2 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nhej1Q3KNJ2 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Nhej1Q3KNJ2 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.76■□□□□ 0.59
Nhej1Q3KNJ2 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nhej1Q3KNJ2 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Nhej1Q3KNJ2 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nhej1Q3KNJ2 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nhej1Q3KNJ2 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Nhej1Q3KNJ2 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.76■□□□□ 0.59
Nhej1Q3KNJ2 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Nhej1Q3KNJ2 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.76■□□□□ 0.59
Nhej1Q3KNJ2 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nhej1Q3KNJ2 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.76■□□□□ 0.59
Nhej1Q3KNJ2 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nhej1Q3KNJ2 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nhej1Q3KNJ2 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nhej1Q3KNJ2 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nhej1Q3KNJ2 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nhej1Q3KNJ2 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Nhej1Q3KNJ2 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Nhej1Q3KNJ2 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nhej1Q3KNJ2 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nhej1Q3KNJ2 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nhej1Q3KNJ2 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Nhej1Q3KNJ2 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nhej1Q3KNJ2 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.75■□□□□ 0.59
Nhej1Q3KNJ2 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nhej1Q3KNJ2 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Nhej1Q3KNJ2 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Nhej1Q3KNJ2 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.75■□□□□ 0.59
Nhej1Q3KNJ2 Gm5874-201ENSMUST00000096101 508 ntBASIC18.75■□□□□ 0.59
Nhej1Q3KNJ2 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nhej1Q3KNJ2 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Nhej1Q3KNJ2 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Nhej1Q3KNJ2 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nhej1Q3KNJ2 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nhej1Q3KNJ2 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nhej1Q3KNJ2 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nhej1Q3KNJ2 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nhej1Q3KNJ2 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nhej1Q3KNJ2 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nhej1Q3KNJ2 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nhej1Q3KNJ2 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nhej1Q3KNJ2 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nhej1Q3KNJ2 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nhej1Q3KNJ2 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Nhej1Q3KNJ2 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nhej1Q3KNJ2 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nhej1Q3KNJ2 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nhej1Q3KNJ2 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nhej1Q3KNJ2 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Nhej1Q3KNJ2 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Nhej1Q3KNJ2 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Nhej1Q3KNJ2 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Nhej1Q3KNJ2 Gm7291-201ENSMUST00000199147 382 ntBASIC18.74■□□□□ 0.59
Nhej1Q3KNJ2 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.74■□□□□ 0.59
Nhej1Q3KNJ2 Gm29791-202ENSMUST00000207888 369 ntBASIC18.74■□□□□ 0.59
Nhej1Q3KNJ2 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nhej1Q3KNJ2 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nhej1Q3KNJ2 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Nhej1Q3KNJ2 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nhej1Q3KNJ2 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nhej1Q3KNJ2 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nhej1Q3KNJ2 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Nhej1Q3KNJ2 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC18.73■□□□□ 0.59
Nhej1Q3KNJ2 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Nhej1Q3KNJ2 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nhej1Q3KNJ2 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nhej1Q3KNJ2 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nhej1Q3KNJ2 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nhej1Q3KNJ2 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nhej1Q3KNJ2 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nhej1Q3KNJ2 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Nhej1Q3KNJ2 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Nhej1Q3KNJ2 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nhej1Q3KNJ2 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nhej1Q3KNJ2 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms