Protein–RNA interactions for Protein: Q2MKA5

Chrna5, Neuronal acetylcholine receptor subunit alpha-5, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna5Q2MKA5 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chrna5Q2MKA5 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Chrna5Q2MKA5 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chrna5Q2MKA5 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Chrna5Q2MKA5 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chrna5Q2MKA5 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chrna5Q2MKA5 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chrna5Q2MKA5 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Chrna5Q2MKA5 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chrna5Q2MKA5 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Chrna5Q2MKA5 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC20.97■□□□□ 0.95
Chrna5Q2MKA5 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC20.97■□□□□ 0.95
Chrna5Q2MKA5 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chrna5Q2MKA5 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chrna5Q2MKA5 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chrna5Q2MKA5 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Chrna5Q2MKA5 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Chrna5Q2MKA5 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC20.96■□□□□ 0.95
Chrna5Q2MKA5 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Chrna5Q2MKA5 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Chrna5Q2MKA5 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Chrna5Q2MKA5 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC20.96■□□□□ 0.95
Chrna5Q2MKA5 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC20.96■□□□□ 0.95
Chrna5Q2MKA5 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Chrna5Q2MKA5 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Chrna5Q2MKA5 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Chrna5Q2MKA5 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Chrna5Q2MKA5 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC20.95■□□□□ 0.94
Chrna5Q2MKA5 Gm37722-201ENSMUST00000193757 208 ntBASIC20.95■□□□□ 0.94
Chrna5Q2MKA5 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Chrna5Q2MKA5 Gm18115-201ENSMUST00000221209 621 ntBASIC20.95■□□□□ 0.94
Chrna5Q2MKA5 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Chrna5Q2MKA5 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
Chrna5Q2MKA5 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Chrna5Q2MKA5 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Chrna5Q2MKA5 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Chrna5Q2MKA5 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Chrna5Q2MKA5 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Chrna5Q2MKA5 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chrna5Q2MKA5 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chrna5Q2MKA5 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chrna5Q2MKA5 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chrna5Q2MKA5 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC20.94■□□□□ 0.94
Chrna5Q2MKA5 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Chrna5Q2MKA5 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chrna5Q2MKA5 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC20.94■□□□□ 0.94
Chrna5Q2MKA5 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chrna5Q2MKA5 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Chrna5Q2MKA5 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Chrna5Q2MKA5 Actl10-202ENSMUST00000226583 1501 ntBASIC20.94■□□□□ 0.94
Chrna5Q2MKA5 Notumos-201ENSMUST00000151998 2659 ntBASIC20.93■□□□□ 0.94
Chrna5Q2MKA5 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Chrna5Q2MKA5 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Chrna5Q2MKA5 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC20.93■□□□□ 0.94
Chrna5Q2MKA5 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC20.93■□□□□ 0.94
Chrna5Q2MKA5 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chrna5Q2MKA5 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chrna5Q2MKA5 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Chrna5Q2MKA5 Spr-ps1-201ENSMUST00000089584 605 ntBASIC20.93■□□□□ 0.94
Chrna5Q2MKA5 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chrna5Q2MKA5 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Chrna5Q2MKA5 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chrna5Q2MKA5 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chrna5Q2MKA5 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chrna5Q2MKA5 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
Chrna5Q2MKA5 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Chrna5Q2MKA5 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Chrna5Q2MKA5 Olfr129-201ENSMUST00000122318 993 ntBASIC20.92■□□□□ 0.94
Chrna5Q2MKA5 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chrna5Q2MKA5 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Chrna5Q2MKA5 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC20.92■□□□□ 0.94
Chrna5Q2MKA5 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chrna5Q2MKA5 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Chrna5Q2MKA5 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Chrna5Q2MKA5 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Chrna5Q2MKA5 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chrna5Q2MKA5 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Chrna5Q2MKA5 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Chrna5Q2MKA5 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Chrna5Q2MKA5 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Chrna5Q2MKA5 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Chrna5Q2MKA5 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
Chrna5Q2MKA5 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Chrna5Q2MKA5 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Chrna5Q2MKA5 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Chrna5Q2MKA5 Gm34391-201ENSMUST00000203706 907 ntBASIC20.91■□□□□ 0.94
Chrna5Q2MKA5 Mzt1-203ENSMUST00000227948 952 ntBASIC20.91■□□□□ 0.94
Chrna5Q2MKA5 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC20.91■□□□□ 0.94
Chrna5Q2MKA5 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.9■□□□□ 0.94
Chrna5Q2MKA5 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chrna5Q2MKA5 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chrna5Q2MKA5 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Chrna5Q2MKA5 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chrna5Q2MKA5 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Chrna5Q2MKA5 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Chrna5Q2MKA5 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC20.9■□□□□ 0.94
Chrna5Q2MKA5 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chrna5Q2MKA5 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chrna5Q2MKA5 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Chrna5Q2MKA5 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms