Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdx4Q07424 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdx4Q07424 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cdx4Q07424 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdx4Q07424 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cdx4Q07424 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC13.62□□□□□ -0.23
Cdx4Q07424 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdx4Q07424 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC13.62□□□□□ -0.23
Cdx4Q07424 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdx4Q07424 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Cdx4Q07424 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC13.62□□□□□ -0.23
Cdx4Q07424 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdx4Q07424 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdx4Q07424 Gm9194-201ENSMUST00000220749 1447 ntBASIC13.62□□□□□ -0.23
Cdx4Q07424 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdx4Q07424 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cdx4Q07424 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdx4Q07424 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdx4Q07424 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cdx4Q07424 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Cdx4Q07424 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdx4Q07424 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdx4Q07424 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdx4Q07424 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cdx4Q07424 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdx4Q07424 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdx4Q07424 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdx4Q07424 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdx4Q07424 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cdx4Q07424 Gm37805-201ENSMUST00000192612 1094 ntBASIC13.61□□□□□ -0.23
Cdx4Q07424 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC13.61□□□□□ -0.23
Cdx4Q07424 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC13.61□□□□□ -0.23
Cdx4Q07424 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC13.61□□□□□ -0.23
Cdx4Q07424 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cdx4Q07424 Gm37811-201ENSMUST00000192416 2601 ntBASIC13.61□□□□□ -0.23
Cdx4Q07424 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdx4Q07424 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdx4Q07424 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdx4Q07424 Gm43672-201ENSMUST00000199072 1731 ntBASIC13.61□□□□□ -0.23
Cdx4Q07424 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdx4Q07424 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdx4Q07424 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdx4Q07424 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdx4Q07424 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cdx4Q07424 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdx4Q07424 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Cdx4Q07424 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC13.6□□□□□ -0.23
Cdx4Q07424 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Cdx4Q07424 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdx4Q07424 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdx4Q07424 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Cdx4Q07424 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdx4Q07424 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC13.6□□□□□ -0.23
Cdx4Q07424 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Cdx4Q07424 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdx4Q07424 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdx4Q07424 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cdx4Q07424 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Cdx4Q07424 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cdx4Q07424 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdx4Q07424 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Cdx4Q07424 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Cdx4Q07424 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cdx4Q07424 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC13.59□□□□□ -0.23
Cdx4Q07424 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Cdx4Q07424 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC13.59□□□□□ -0.23
Cdx4Q07424 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cdx4Q07424 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Cdx4Q07424 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdx4Q07424 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Cdx4Q07424 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC13.59□□□□□ -0.23
Cdx4Q07424 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdx4Q07424 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC13.59□□□□□ -0.23
Cdx4Q07424 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cdx4Q07424 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Cdx4Q07424 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
Cdx4Q07424 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
Cdx4Q07424 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdx4Q07424 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Cdx4Q07424 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdx4Q07424 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Cdx4Q07424 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdx4Q07424 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cdx4Q07424 Gm27275-201ENSMUST00000184318 272 ntBASIC13.58□□□□□ -0.24
Cdx4Q07424 AC107452.1-201ENSMUST00000227963 481 ntBASIC13.58□□□□□ -0.24
Cdx4Q07424 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdx4Q07424 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdx4Q07424 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdx4Q07424 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdx4Q07424 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdx4Q07424 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdx4Q07424 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC13.58□□□□□ -0.24
Cdx4Q07424 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdx4Q07424 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdx4Q07424 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdx4Q07424 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdx4Q07424 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdx4Q07424 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdx4Q07424 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC13.57□□□□□ -0.24
Cdx4Q07424 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms