Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.28■□□□□ 0.36
Sox4Q06831 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.28■□□□□ 0.36
Sox4Q06831 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sox4Q06831 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Sox4Q06831 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.28■□□□□ 0.36
Sox4Q06831 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
Sox4Q06831 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.28■□□□□ 0.36
Sox4Q06831 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sox4Q06831 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sox4Q06831 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Sox4Q06831 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sox4Q06831 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Sox4Q06831 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Sox4Q06831 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Sox4Q06831 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Sox4Q06831 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Sox4Q06831 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sox4Q06831 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sox4Q06831 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sox4Q06831 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Sox4Q06831 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sox4Q06831 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Sox4Q06831 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
Sox4Q06831 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Sox4Q06831 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
Sox4Q06831 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Sox4Q06831 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sox4Q06831 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sox4Q06831 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.27■□□□□ 0.35
Sox4Q06831 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sox4Q06831 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
Sox4Q06831 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Sox4Q06831 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.27■□□□□ 0.35
Sox4Q06831 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sox4Q06831 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sox4Q06831 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Sox4Q06831 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sox4Q06831 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sox4Q06831 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sox4Q06831 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Sox4Q06831 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Sox4Q06831 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sox4Q06831 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
Sox4Q06831 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Sox4Q06831 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sox4Q06831 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sox4Q06831 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sox4Q06831 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sox4Q06831 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sox4Q06831 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sox4Q06831 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sox4Q06831 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sox4Q06831 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.26■□□□□ 0.35
Sox4Q06831 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sox4Q06831 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Sox4Q06831 Mir5122-201ENSMUST00000175004 89 ntBASIC17.26■□□□□ 0.35
Sox4Q06831 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
Sox4Q06831 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sox4Q06831 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Sox4Q06831 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sox4Q06831 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sox4Q06831 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Sox4Q06831 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Sox4Q06831 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Sox4Q06831 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Sox4Q06831 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sox4Q06831 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sox4Q06831 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.25■□□□□ 0.35
Sox4Q06831 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.25■□□□□ 0.35
Sox4Q06831 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.25■□□□□ 0.35
Sox4Q06831 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Sox4Q06831 Gm4974-201ENSMUST00000209974 875 ntBASIC17.25■□□□□ 0.35
Sox4Q06831 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sox4Q06831 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sox4Q06831 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sox4Q06831 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Sox4Q06831 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sox4Q06831 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sox4Q06831 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sox4Q06831 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.24■□□□□ 0.35
Sox4Q06831 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Sox4Q06831 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Sox4Q06831 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sox4Q06831 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Sox4Q06831 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sox4Q06831 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Sox4Q06831 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.24■□□□□ 0.35
Sox4Q06831 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Sox4Q06831 Mir6982-201ENSMUST00000184354 68 ntBASIC17.24■□□□□ 0.35
Sox4Q06831 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Sox4Q06831 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sox4Q06831 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Sox4Q06831 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.24■□□□□ 0.35
Sox4Q06831 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Sox4Q06831 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Sox4Q06831 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
Sox4Q06831 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sox4Q06831 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sox4Q06831 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sox4Q06831 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms