Protein–RNA interactions for Protein: Q03404

Tff2, Trefoil factor 2, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff2Q03404 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tff2Q03404 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC19.42■□□□□ 0.7
Tff2Q03404 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tff2Q03404 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tff2Q03404 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.42■□□□□ 0.7
Tff2Q03404 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tff2Q03404 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Tff2Q03404 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tff2Q03404 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Tff2Q03404 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Tff2Q03404 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tff2Q03404 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tff2Q03404 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tff2Q03404 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tff2Q03404 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tff2Q03404 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tff2Q03404 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC19.41■□□□□ 0.7
Tff2Q03404 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC19.41■□□□□ 0.7
Tff2Q03404 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC19.41■□□□□ 0.7
Tff2Q03404 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tff2Q03404 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC19.41■□□□□ 0.7
Tff2Q03404 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Tff2Q03404 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Tff2Q03404 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tff2Q03404 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tff2Q03404 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tff2Q03404 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tff2Q03404 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
Tff2Q03404 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.4■□□□□ 0.7
Tff2Q03404 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tff2Q03404 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tff2Q03404 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tff2Q03404 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
Tff2Q03404 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tff2Q03404 Gm9731-201ENSMUST00000209480 747 ntBASIC19.4■□□□□ 0.7
Tff2Q03404 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Tff2Q03404 Il3ra-202ENSMUST00000223589 738 ntBASIC19.4■□□□□ 0.7
Tff2Q03404 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tff2Q03404 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tff2Q03404 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tff2Q03404 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tff2Q03404 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tff2Q03404 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
Tff2Q03404 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Tff2Q03404 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tff2Q03404 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tff2Q03404 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tff2Q03404 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tff2Q03404 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tff2Q03404 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
Tff2Q03404 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tff2Q03404 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Tff2Q03404 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tff2Q03404 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tff2Q03404 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.38■□□□□ 0.69
Tff2Q03404 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC19.38■□□□□ 0.69
Tff2Q03404 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Tff2Q03404 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Tff2Q03404 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC19.38■□□□□ 0.69
Tff2Q03404 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Tff2Q03404 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tff2Q03404 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Tff2Q03404 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Tff2Q03404 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC19.38■□□□□ 0.69
Tff2Q03404 Gm29791-202ENSMUST00000207888 369 ntBASIC19.38■□□□□ 0.69
Tff2Q03404 Gm18669-201ENSMUST00000216049 778 ntBASIC19.38■□□□□ 0.69
Tff2Q03404 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Tff2Q03404 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tff2Q03404 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Tff2Q03404 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tff2Q03404 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tff2Q03404 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tff2Q03404 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tff2Q03404 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Tff2Q03404 Gm10418-201ENSMUST00000100943 576 ntBASIC19.37■□□□□ 0.69
Tff2Q03404 Umpk-ps-201ENSMUST00000211897 827 ntBASIC19.37■□□□□ 0.69
Tff2Q03404 AC120002.2-201ENSMUST00000220205 773 ntBASIC19.37■□□□□ 0.69
Tff2Q03404 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tff2Q03404 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tff2Q03404 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tff2Q03404 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tff2Q03404 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Tff2Q03404 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.37■□□□□ 0.69
Tff2Q03404 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tff2Q03404 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tff2Q03404 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tff2Q03404 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tff2Q03404 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tff2Q03404 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Tff2Q03404 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tff2Q03404 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tff2Q03404 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tff2Q03404 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Tff2Q03404 Gm11355-201ENSMUST00000121120 306 ntBASIC19.36■□□□□ 0.69
Tff2Q03404 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Tff2Q03404 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC19.36■□□□□ 0.69
Tff2Q03404 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Tff2Q03404 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Tff2Q03404 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tff2Q03404 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms