Protein–RNA interactions for Protein: P97929

Brca2, Breast cancer type 2 susceptibility protein homolog, mousemouse

Predictions only

Length 3,329 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca2P97929 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Brca2P97929 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Brca2P97929 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Brca2P97929 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Brca2P97929 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Brca2P97929 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
Brca2P97929 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Brca2P97929 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
Brca2P97929 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Brca2P97929 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Brca2P97929 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Brca2P97929 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Brca2P97929 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Brca2P97929 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Brca2P97929 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Brca2P97929 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Brca2P97929 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Brca2P97929 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
Brca2P97929 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Brca2P97929 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.01■□□□□ 0.31
Brca2P97929 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Brca2P97929 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Brca2P97929 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17■□□□□ 0.31
Brca2P97929 AC131586.3-201ENSMUST00000228355 1367 ntBASIC17■□□□□ 0.31
Brca2P97929 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Brca2P97929 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Brca2P97929 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Brca2P97929 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17■□□□□ 0.31
Brca2P97929 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Brca2P97929 Gm7638-201ENSMUST00000121348 967 ntBASIC17■□□□□ 0.31
Brca2P97929 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17■□□□□ 0.31
Brca2P97929 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Brca2P97929 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17■□□□□ 0.31
Brca2P97929 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC17■□□□□ 0.31
Brca2P97929 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Brca2P97929 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Brca2P97929 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Brca2P97929 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Brca2P97929 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Brca2P97929 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Brca2P97929 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC16.99■□□□□ 0.31
Brca2P97929 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Brca2P97929 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Brca2P97929 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Brca2P97929 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Brca2P97929 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
Brca2P97929 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Brca2P97929 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC16.99■□□□□ 0.31
Brca2P97929 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Brca2P97929 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Brca2P97929 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Brca2P97929 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Brca2P97929 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Brca2P97929 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Brca2P97929 Olfr129-201ENSMUST00000122318 993 ntBASIC16.98■□□□□ 0.31
Brca2P97929 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.98■□□□□ 0.31
Brca2P97929 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Brca2P97929 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.98■□□□□ 0.31
Brca2P97929 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Brca2P97929 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Brca2P97929 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Brca2P97929 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Brca2P97929 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
Brca2P97929 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Brca2P97929 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
Brca2P97929 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Brca2P97929 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC16.98■□□□□ 0.31
Brca2P97929 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Brca2P97929 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.98■□□□□ 0.31
Brca2P97929 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Brca2P97929 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Brca2P97929 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Brca2P97929 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Brca2P97929 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Brca2P97929 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Brca2P97929 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC16.97■□□□□ 0.31
Brca2P97929 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC16.97■□□□□ 0.31
Brca2P97929 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Brca2P97929 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Brca2P97929 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Brca2P97929 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.97■□□□□ 0.31
Brca2P97929 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Brca2P97929 Vti1a-206ENSMUST00000225529 1244 ntBASIC16.97■□□□□ 0.31
Brca2P97929 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Brca2P97929 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Brca2P97929 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Brca2P97929 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.96■□□□□ 0.31
Brca2P97929 Gm43575-201ENSMUST00000196420 516 ntBASIC16.96■□□□□ 0.31
Brca2P97929 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.96■□□□□ 0.31
Brca2P97929 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Brca2P97929 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Brca2P97929 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Brca2P97929 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Brca2P97929 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.96■□□□□ 0.31
Brca2P97929 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.96■□□□□ 0.31
Brca2P97929 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Brca2P97929 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.96■□□□□ 0.31
Brca2P97929 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Brca2P97929 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
Brca2P97929 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.96■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms