Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nkx3-2P97503 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nkx3-2P97503 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.6■□□□□ 0.25
Nkx3-2P97503 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx3-2P97503 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx3-2P97503 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx3-2P97503 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx3-2P97503 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Nkx3-2P97503 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx3-2P97503 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC16.6■□□□□ 0.25
Nkx3-2P97503 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx3-2P97503 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx3-2P97503 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
Nkx3-2P97503 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.6■□□□□ 0.25
Nkx3-2P97503 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Nkx3-2P97503 Odf3b-204ENSMUST00000227834 930 ntBASIC16.6■□□□□ 0.25
Nkx3-2P97503 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx3-2P97503 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx3-2P97503 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx3-2P97503 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx3-2P97503 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx3-2P97503 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx3-2P97503 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx3-2P97503 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx3-2P97503 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx3-2P97503 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx3-2P97503 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nkx3-2P97503 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Nkx3-2P97503 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
Nkx3-2P97503 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.59■□□□□ 0.25
Nkx3-2P97503 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
Nkx3-2P97503 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Nkx3-2P97503 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.59■□□□□ 0.25
Nkx3-2P97503 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.59■□□□□ 0.25
Nkx3-2P97503 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nkx3-2P97503 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Nkx3-2P97503 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Nkx3-2P97503 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nkx3-2P97503 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Nkx3-2P97503 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nkx3-2P97503 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nkx3-2P97503 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.59■□□□□ 0.25
Nkx3-2P97503 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.25
Nkx3-2P97503 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.58■□□□□ 0.25
Nkx3-2P97503 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Nkx3-2P97503 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Nkx3-2P97503 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Nkx3-2P97503 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nkx3-2P97503 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nkx3-2P97503 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Nkx3-2P97503 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.58■□□□□ 0.24
Nkx3-2P97503 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Nkx3-2P97503 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nkx3-2P97503 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Nkx3-2P97503 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nkx3-2P97503 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Nkx3-2P97503 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Nkx3-2P97503 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Nkx3-2P97503 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Nkx3-2P97503 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Nkx3-2P97503 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nkx3-2P97503 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nkx3-2P97503 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nkx3-2P97503 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nkx3-2P97503 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nkx3-2P97503 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.58■□□□□ 0.24
Nkx3-2P97503 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nkx3-2P97503 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Nkx3-2P97503 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nkx3-2P97503 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nkx3-2P97503 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nkx3-2P97503 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nkx3-2P97503 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nkx3-2P97503 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nkx3-2P97503 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nkx3-2P97503 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nkx3-2P97503 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nkx3-2P97503 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nkx3-2P97503 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Nkx3-2P97503 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Nkx3-2P97503 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nkx3-2P97503 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Nkx3-2P97503 Gm11643-201ENSMUST00000119578 864 ntBASIC16.57■□□□□ 0.24
Nkx3-2P97503 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.57■□□□□ 0.24
Nkx3-2P97503 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Nkx3-2P97503 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Nkx3-2P97503 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC16.57■□□□□ 0.24
Nkx3-2P97503 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC16.57■□□□□ 0.24
Nkx3-2P97503 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nkx3-2P97503 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nkx3-2P97503 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nkx3-2P97503 Gm42922-201ENSMUST00000195887 2078 ntBASIC16.57■□□□□ 0.24
Nkx3-2P97503 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nkx3-2P97503 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nkx3-2P97503 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nkx3-2P97503 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Nkx3-2P97503 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nkx3-2P97503 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nkx3-2P97503 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nkx3-2P97503 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms