Protein–RNA interactions for Protein: P97390

Vps45, Vacuolar protein sorting-associated protein 45, mousemouse

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps45P97390 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.17■□□□□ 0.5
Vps45P97390 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Vps45P97390 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Vps45P97390 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.17■□□□□ 0.5
Vps45P97390 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps45P97390 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps45P97390 Gm5417-201ENSMUST00000079706 384 ntBASIC18.17■□□□□ 0.5
Vps45P97390 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.17■□□□□ 0.5
Vps45P97390 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps45P97390 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps45P97390 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Vps45P97390 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Vps45P97390 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps45P97390 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps45P97390 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.17■□□□□ 0.5
Vps45P97390 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps45P97390 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps45P97390 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.16■□□□□ 0.5
Vps45P97390 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Vps45P97390 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Vps45P97390 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Vps45P97390 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps45P97390 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Vps45P97390 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.16■□□□□ 0.5
Vps45P97390 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps45P97390 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps45P97390 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps45P97390 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps45P97390 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Vps45P97390 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.16■□□□□ 0.5
Vps45P97390 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps45P97390 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps45P97390 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Vps45P97390 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.16■□□□□ 0.5
Vps45P97390 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps45P97390 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps45P97390 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps45P97390 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps45P97390 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps45P97390 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps45P97390 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps45P97390 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps45P97390 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Vps45P97390 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Vps45P97390 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Vps45P97390 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC18.15■□□□□ 0.5
Vps45P97390 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps45P97390 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps45P97390 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps45P97390 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps45P97390 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.15■□□□□ 0.5
Vps45P97390 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Vps45P97390 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.15■□□□□ 0.5
Vps45P97390 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.15■□□□□ 0.5
Vps45P97390 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.14■□□□□ 0.49
Vps45P97390 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vps45P97390 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vps45P97390 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vps45P97390 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Vps45P97390 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vps45P97390 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vps45P97390 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vps45P97390 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Vps45P97390 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Vps45P97390 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Vps45P97390 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.13■□□□□ 0.49
Vps45P97390 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vps45P97390 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vps45P97390 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vps45P97390 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.13■□□□□ 0.49
Vps45P97390 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Vps45P97390 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vps45P97390 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vps45P97390 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Vps45P97390 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Vps45P97390 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.12■□□□□ 0.49
Vps45P97390 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vps45P97390 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vps45P97390 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vps45P97390 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Vps45P97390 Gm10138-203ENSMUST00000206952 366 ntBASIC18.12■□□□□ 0.49
Vps45P97390 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Vps45P97390 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vps45P97390 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vps45P97390 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vps45P97390 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vps45P97390 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.12■□□□□ 0.49
Vps45P97390 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vps45P97390 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vps45P97390 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Vps45P97390 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vps45P97390 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vps45P97390 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vps45P97390 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC18.11■□□□□ 0.49
Vps45P97390 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vps45P97390 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Vps45P97390 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Vps45P97390 Gm45560-201ENSMUST00000211492 1472 ntBASIC18.11■□□□□ 0.49
Vps45P97390 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vps45P97390 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms