Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim43cP86449 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim43cP86449 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC19.14■□□□□ 0.65
Trim43cP86449 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim43cP86449 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim43cP86449 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Trim43cP86449 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim43cP86449 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trim43cP86449 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim43cP86449 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim43cP86449 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim43cP86449 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC19.13■□□□□ 0.65
Trim43cP86449 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim43cP86449 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC19.13■□□□□ 0.65
Trim43cP86449 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Trim43cP86449 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Trim43cP86449 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC19.13■□□□□ 0.65
Trim43cP86449 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.13■□□□□ 0.65
Trim43cP86449 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Trim43cP86449 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim43cP86449 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim43cP86449 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim43cP86449 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim43cP86449 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim43cP86449 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Trim43cP86449 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC19.12■□□□□ 0.65
Trim43cP86449 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Trim43cP86449 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Trim43cP86449 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Trim43cP86449 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim43cP86449 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim43cP86449 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim43cP86449 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Trim43cP86449 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim43cP86449 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim43cP86449 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim43cP86449 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim43cP86449 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim43cP86449 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.11■□□□□ 0.65
Trim43cP86449 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Trim43cP86449 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim43cP86449 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
Trim43cP86449 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Trim43cP86449 Gm13168-201ENSMUST00000121771 632 ntBASIC19.11■□□□□ 0.65
Trim43cP86449 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trim43cP86449 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trim43cP86449 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Trim43cP86449 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim43cP86449 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim43cP86449 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim43cP86449 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trim43cP86449 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim43cP86449 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trim43cP86449 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim43cP86449 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim43cP86449 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim43cP86449 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
Trim43cP86449 Gm15378-201ENSMUST00000121894 207 ntBASIC19.1■□□□□ 0.65
Trim43cP86449 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC19.1■□□□□ 0.65
Trim43cP86449 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC19.1■□□□□ 0.65
Trim43cP86449 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim43cP86449 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC19.1■□□□□ 0.65
Trim43cP86449 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trim43cP86449 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim43cP86449 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Trim43cP86449 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim43cP86449 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim43cP86449 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim43cP86449 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim43cP86449 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim43cP86449 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim43cP86449 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim43cP86449 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC19.09■□□□□ 0.65
Trim43cP86449 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim43cP86449 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trim43cP86449 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim43cP86449 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trim43cP86449 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.09■□□□□ 0.65
Trim43cP86449 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Trim43cP86449 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim43cP86449 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC19.09■□□□□ 0.65
Trim43cP86449 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trim43cP86449 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim43cP86449 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim43cP86449 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim43cP86449 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim43cP86449 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trim43cP86449 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim43cP86449 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trim43cP86449 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
Trim43cP86449 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC19.08■□□□□ 0.65
Trim43cP86449 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Trim43cP86449 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trim43cP86449 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trim43cP86449 Gm37519-201ENSMUST00000191687 2210 ntBASIC19.08■□□□□ 0.65
Trim43cP86449 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Trim43cP86449 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trim43cP86449 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Trim43cP86449 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC19.08■□□□□ 0.64
Trim43cP86449 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms