Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SgcbP82349 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SgcbP82349 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SgcbP82349 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
SgcbP82349 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
SgcbP82349 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SgcbP82349 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
SgcbP82349 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC15.68■□□□□ 0.1
SgcbP82349 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
SgcbP82349 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SgcbP82349 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SgcbP82349 Gm5112-201ENSMUST00000204407 2368 ntBASIC15.68■□□□□ 0.1
SgcbP82349 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SgcbP82349 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SgcbP82349 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SgcbP82349 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SgcbP82349 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SgcbP82349 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
SgcbP82349 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC15.68■□□□□ 0.1
SgcbP82349 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SgcbP82349 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SgcbP82349 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SgcbP82349 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC15.68■□□□□ 0.1
SgcbP82349 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SgcbP82349 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SgcbP82349 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC15.68■□□□□ 0.1
SgcbP82349 Gm37292-201ENSMUST00000192062 758 ntBASIC15.68■□□□□ 0.1
SgcbP82349 AC166341.7-201ENSMUST00000221698 126 ntBASIC15.68■□□□□ 0.1
SgcbP82349 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SgcbP82349 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SgcbP82349 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SgcbP82349 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
SgcbP82349 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SgcbP82349 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
SgcbP82349 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC15.68■□□□□ 0.1
SgcbP82349 Gm10654-201ENSMUST00000098653 1633 ntBASIC15.68■□□□□ 0.1
SgcbP82349 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SgcbP82349 Dmtn-210ENSMUST00000228824 2377 ntBASIC15.68■□□□□ 0.1
SgcbP82349 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
SgcbP82349 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SgcbP82349 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SgcbP82349 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SgcbP82349 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SgcbP82349 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SgcbP82349 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
SgcbP82349 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
SgcbP82349 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SgcbP82349 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
SgcbP82349 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SgcbP82349 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
SgcbP82349 Mir1199-201ENSMUST00000117015 119 ntBASIC15.67■□□□□ 0.1
SgcbP82349 Gm11643-201ENSMUST00000119578 864 ntBASIC15.67■□□□□ 0.1
SgcbP82349 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SgcbP82349 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SgcbP82349 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC15.67■□□□□ 0.1
SgcbP82349 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SgcbP82349 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
SgcbP82349 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SgcbP82349 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SgcbP82349 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SgcbP82349 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SgcbP82349 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SgcbP82349 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
SgcbP82349 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SgcbP82349 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
SgcbP82349 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC15.66■□□□□ 0.1
SgcbP82349 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SgcbP82349 Gm37374-201ENSMUST00000194954 1829 ntBASIC15.66■□□□□ 0.1
SgcbP82349 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SgcbP82349 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SgcbP82349 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SgcbP82349 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SgcbP82349 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SgcbP82349 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SgcbP82349 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SgcbP82349 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SgcbP82349 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SgcbP82349 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SgcbP82349 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SgcbP82349 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC15.66■□□□□ 0.1
SgcbP82349 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SgcbP82349 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
SgcbP82349 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SgcbP82349 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SgcbP82349 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SgcbP82349 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SgcbP82349 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SgcbP82349 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SgcbP82349 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SgcbP82349 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
SgcbP82349 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SgcbP82349 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SgcbP82349 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SgcbP82349 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SgcbP82349 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
SgcbP82349 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SgcbP82349 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC15.65■□□□□ 0.1
SgcbP82349 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SgcbP82349 Gm29791-202ENSMUST00000207888 369 ntBASIC15.65■□□□□ 0.1
SgcbP82349 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms