Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CiitaP79621 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
CiitaP79621 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CiitaP79621 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CiitaP79621 Mir8112-201ENSMUST00000184382 131 ntBASIC19.1■□□□□ 0.65
CiitaP79621 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC19.1■□□□□ 0.65
CiitaP79621 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CiitaP79621 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CiitaP79621 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CiitaP79621 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CiitaP79621 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CiitaP79621 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CiitaP79621 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
CiitaP79621 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
CiitaP79621 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CiitaP79621 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CiitaP79621 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CiitaP79621 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CiitaP79621 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CiitaP79621 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC19.09■□□□□ 0.65
CiitaP79621 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CiitaP79621 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CiitaP79621 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.09■□□□□ 0.65
CiitaP79621 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
CiitaP79621 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CiitaP79621 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CiitaP79621 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CiitaP79621 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CiitaP79621 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CiitaP79621 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CiitaP79621 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CiitaP79621 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CiitaP79621 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CiitaP79621 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CiitaP79621 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CiitaP79621 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC19.08■□□□□ 0.64
CiitaP79621 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CiitaP79621 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC19.08■□□□□ 0.64
CiitaP79621 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CiitaP79621 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CiitaP79621 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CiitaP79621 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CiitaP79621 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CiitaP79621 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
CiitaP79621 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CiitaP79621 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CiitaP79621 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC19.07■□□□□ 0.64
CiitaP79621 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
CiitaP79621 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CiitaP79621 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC19.07■□□□□ 0.64
CiitaP79621 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CiitaP79621 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CiitaP79621 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CiitaP79621 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CiitaP79621 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
CiitaP79621 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CiitaP79621 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CiitaP79621 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CiitaP79621 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC19.06■□□□□ 0.64
CiitaP79621 Gm10231-201ENSMUST00000181584 441 ntBASIC19.06■□□□□ 0.64
CiitaP79621 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CiitaP79621 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CiitaP79621 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CiitaP79621 Gm43353-201ENSMUST00000199224 1295 ntBASIC19.06■□□□□ 0.64
CiitaP79621 Gm10175-202ENSMUST00000208752 441 ntBASIC19.06■□□□□ 0.64
CiitaP79621 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CiitaP79621 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC19.06■□□□□ 0.64
CiitaP79621 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CiitaP79621 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
CiitaP79621 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CiitaP79621 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CiitaP79621 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CiitaP79621 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CiitaP79621 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
CiitaP79621 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CiitaP79621 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CiitaP79621 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CiitaP79621 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC19.05■□□□□ 0.64
CiitaP79621 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CiitaP79621 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CiitaP79621 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CiitaP79621 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC19.05■□□□□ 0.64
CiitaP79621 Gm27463-201ENSMUST00000183569 57 ntBASIC19.05■□□□□ 0.64
CiitaP79621 Gm7889-201ENSMUST00000185591 958 ntBASIC19.05■□□□□ 0.64
CiitaP79621 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC19.05■□□□□ 0.64
CiitaP79621 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CiitaP79621 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CiitaP79621 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CiitaP79621 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CiitaP79621 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CiitaP79621 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CiitaP79621 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CiitaP79621 Gm5828-201ENSMUST00000071842 1860 ntBASIC19.05■□□□□ 0.64
CiitaP79621 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CiitaP79621 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CiitaP79621 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CiitaP79621 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CiitaP79621 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC19.04■□□□□ 0.64
CiitaP79621 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CiitaP79621 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms