Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ThraP63058 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
ThraP63058 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.79■□□□□ 0.44
ThraP63058 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
ThraP63058 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.79■□□□□ 0.44
ThraP63058 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ThraP63058 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ThraP63058 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ThraP63058 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
ThraP63058 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ThraP63058 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
ThraP63058 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ThraP63058 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
ThraP63058 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ThraP63058 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ThraP63058 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.79■□□□□ 0.44
ThraP63058 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
ThraP63058 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ThraP63058 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ThraP63058 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ThraP63058 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
ThraP63058 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.79■□□□□ 0.44
ThraP63058 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ThraP63058 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.79■□□□□ 0.44
ThraP63058 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ThraP63058 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ThraP63058 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
ThraP63058 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ThraP63058 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ThraP63058 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
ThraP63058 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
ThraP63058 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ThraP63058 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
ThraP63058 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ThraP63058 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ThraP63058 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ThraP63058 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.78■□□□□ 0.44
ThraP63058 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.78■□□□□ 0.44
ThraP63058 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
ThraP63058 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ThraP63058 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ThraP63058 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ThraP63058 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ThraP63058 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ThraP63058 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.77■□□□□ 0.44
ThraP63058 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ThraP63058 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ThraP63058 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ThraP63058 Gm13158-201ENSMUST00000122007 736 ntBASIC17.77■□□□□ 0.44
ThraP63058 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ThraP63058 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
ThraP63058 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
ThraP63058 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ThraP63058 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ThraP63058 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.77■□□□□ 0.43
ThraP63058 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ThraP63058 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ThraP63058 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ThraP63058 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ThraP63058 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
ThraP63058 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ThraP63058 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
ThraP63058 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ThraP63058 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ThraP63058 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ThraP63058 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ThraP63058 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ThraP63058 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ThraP63058 Gm15378-201ENSMUST00000121894 207 ntBASIC17.76■□□□□ 0.43
ThraP63058 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ThraP63058 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.76■□□□□ 0.43
ThraP63058 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.76■□□□□ 0.43
ThraP63058 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ThraP63058 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
ThraP63058 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ThraP63058 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ThraP63058 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ThraP63058 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ThraP63058 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
ThraP63058 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.76■□□□□ 0.43
ThraP63058 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ThraP63058 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
ThraP63058 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.75■□□□□ 0.43
ThraP63058 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
ThraP63058 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
ThraP63058 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
ThraP63058 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ThraP63058 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
ThraP63058 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.75■□□□□ 0.43
ThraP63058 Gm715-201ENSMUST00000117865 831 ntBASIC17.75■□□□□ 0.43
ThraP63058 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
ThraP63058 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.75■□□□□ 0.43
ThraP63058 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.75■□□□□ 0.43
ThraP63058 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.75■□□□□ 0.43
ThraP63058 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ThraP63058 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ThraP63058 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ThraP63058 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
ThraP63058 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ThraP63058 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms