Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Lhx1P63006 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lhx1P63006 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lhx1P63006 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lhx1P63006 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lhx1P63006 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lhx1P63006 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lhx1P63006 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Lhx1P63006 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Lhx1P63006 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Lhx1P63006 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lhx1P63006 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lhx1P63006 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lhx1P63006 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lhx1P63006 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lhx1P63006 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lhx1P63006 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Lhx1P63006 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lhx1P63006 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lhx1P63006 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Lhx1P63006 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Lhx1P63006 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lhx1P63006 Gm15565-201ENSMUST00000118890 427 ntBASIC17.3■□□□□ 0.36
Lhx1P63006 Gm12085-201ENSMUST00000119263 940 ntBASIC17.3■□□□□ 0.36
Lhx1P63006 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Lhx1P63006 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Lhx1P63006 Gm30025-201ENSMUST00000218555 728 ntBASIC17.3■□□□□ 0.36
Lhx1P63006 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lhx1P63006 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Lhx1P63006 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lhx1P63006 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lhx1P63006 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.3■□□□□ 0.36
Lhx1P63006 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Lhx1P63006 Idnk-204ENSMUST00000226010 1898 ntBASIC17.3■□□□□ 0.36
Lhx1P63006 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.3■□□□□ 0.36
Lhx1P63006 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.29■□□□□ 0.36
Lhx1P63006 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lhx1P63006 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.29■□□□□ 0.36
Lhx1P63006 Gm38027-201ENSMUST00000192315 235 ntBASIC17.29■□□□□ 0.36
Lhx1P63006 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lhx1P63006 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Lhx1P63006 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Lhx1P63006 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lhx1P63006 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Lhx1P63006 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lhx1P63006 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lhx1P63006 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lhx1P63006 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lhx1P63006 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lhx1P63006 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Lhx1P63006 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lhx1P63006 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lhx1P63006 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
Lhx1P63006 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.28■□□□□ 0.36
Lhx1P63006 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Lhx1P63006 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lhx1P63006 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Lhx1P63006 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Lhx1P63006 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lhx1P63006 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lhx1P63006 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lhx1P63006 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.28■□□□□ 0.36
Lhx1P63006 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Lhx1P63006 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lhx1P63006 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lhx1P63006 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Lhx1P63006 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Lhx1P63006 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Lhx1P63006 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Lhx1P63006 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Lhx1P63006 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lhx1P63006 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.27■□□□□ 0.36
Lhx1P63006 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lhx1P63006 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.27■□□□□ 0.36
Lhx1P63006 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lhx1P63006 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Lhx1P63006 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.27■□□□□ 0.36
Lhx1P63006 Gm24841-201ENSMUST00000158676 357 ntBASIC17.27■□□□□ 0.36
Lhx1P63006 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Lhx1P63006 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Lhx1P63006 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.27■□□□□ 0.36
Lhx1P63006 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lhx1P63006 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lhx1P63006 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lhx1P63006 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Lhx1P63006 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Lhx1P63006 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Lhx1P63006 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lhx1P63006 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Lhx1P63006 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lhx1P63006 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lhx1P63006 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lhx1P63006 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lhx1P63006 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lhx1P63006 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Lhx1P63006 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Lhx1P63006 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lhx1P63006 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Lhx1P63006 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
Lhx1P63006 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms