Protein–RNA interactions for Protein: P62069

Usp46, Ubiquitin carboxyl-terminal hydrolase 46, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp46P62069 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp46P62069 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Usp46P62069 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Usp46P62069 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Usp46P62069 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp46P62069 Gm13401-201ENSMUST00000117074 291 ntBASIC18.38■□□□□ 0.53
Usp46P62069 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp46P62069 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Usp46P62069 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Usp46P62069 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Usp46P62069 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Usp46P62069 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.38■□□□□ 0.53
Usp46P62069 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Usp46P62069 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Usp46P62069 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Usp46P62069 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp46P62069 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Usp46P62069 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp46P62069 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Usp46P62069 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.37■□□□□ 0.53
Usp46P62069 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp46P62069 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.37■□□□□ 0.53
Usp46P62069 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp46P62069 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp46P62069 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp46P62069 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp46P62069 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Usp46P62069 Gm42790-201ENSMUST00000201268 969 ntBASIC18.37■□□□□ 0.53
Usp46P62069 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp46P62069 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp46P62069 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
Usp46P62069 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Usp46P62069 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp46P62069 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.37■□□□□ 0.53
Usp46P62069 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Usp46P62069 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp46P62069 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.36■□□□□ 0.53
Usp46P62069 Gm12085-201ENSMUST00000119263 940 ntBASIC18.36■□□□□ 0.53
Usp46P62069 Gm13836-201ENSMUST00000121159 501 ntBASIC18.36■□□□□ 0.53
Usp46P62069 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Usp46P62069 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp46P62069 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp46P62069 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Usp46P62069 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Usp46P62069 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC18.36■□□□□ 0.53
Usp46P62069 Gm30025-201ENSMUST00000218555 728 ntBASIC18.36■□□□□ 0.53
Usp46P62069 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.36■□□□□ 0.53
Usp46P62069 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.36■□□□□ 0.53
Usp46P62069 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp46P62069 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp46P62069 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp46P62069 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Usp46P62069 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp46P62069 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.35■□□□□ 0.53
Usp46P62069 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.35■□□□□ 0.53
Usp46P62069 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp46P62069 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp46P62069 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp46P62069 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp46P62069 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Usp46P62069 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
Usp46P62069 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC18.35■□□□□ 0.53
Usp46P62069 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp46P62069 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp46P62069 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp46P62069 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Usp46P62069 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.35■□□□□ 0.53
Usp46P62069 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp46P62069 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp46P62069 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp46P62069 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp46P62069 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp46P62069 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp46P62069 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp46P62069 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.34■□□□□ 0.53
Usp46P62069 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp46P62069 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp46P62069 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Usp46P62069 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Usp46P62069 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
Usp46P62069 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp46P62069 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Usp46P62069 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Usp46P62069 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp46P62069 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp46P62069 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp46P62069 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.34■□□□□ 0.53
Usp46P62069 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp46P62069 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp46P62069 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp46P62069 Gm9987-201ENSMUST00000069768 567 ntBASIC18.34■□□□□ 0.53
Usp46P62069 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Usp46P62069 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp46P62069 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp46P62069 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp46P62069 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp46P62069 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp46P62069 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp46P62069 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp46P62069 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms