Protein–RNA interactions for Protein: P58873

Rhbdl3, Rhomboid-related protein 3, mousemouse

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhbdl3P58873 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rhbdl3P58873 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC20.93■□□□□ 0.94
Rhbdl3P58873 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rhbdl3P58873 Spsb2-203ENSMUST00000112473 1322 ntBASIC20.93■□□□□ 0.94
Rhbdl3P58873 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rhbdl3P58873 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rhbdl3P58873 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rhbdl3P58873 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Rhbdl3P58873 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rhbdl3P58873 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rhbdl3P58873 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rhbdl3P58873 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rhbdl3P58873 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rhbdl3P58873 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.92■□□□□ 0.94
Rhbdl3P58873 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Rhbdl3P58873 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rhbdl3P58873 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rhbdl3P58873 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rhbdl3P58873 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Rhbdl3P58873 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC20.91■□□□□ 0.94
Rhbdl3P58873 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC20.91■□□□□ 0.94
Rhbdl3P58873 Mir1668-201ENSMUST00000184114 107 ntBASIC20.91■□□□□ 0.94
Rhbdl3P58873 Gm33142-201ENSMUST00000193913 867 ntBASIC20.91■□□□□ 0.94
Rhbdl3P58873 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Rhbdl3P58873 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Rhbdl3P58873 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC20.91■□□□□ 0.94
Rhbdl3P58873 Gm21559-201ENSMUST00000220638 855 ntBASIC20.91■□□□□ 0.94
Rhbdl3P58873 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rhbdl3P58873 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rhbdl3P58873 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rhbdl3P58873 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rhbdl3P58873 Gm8587-201ENSMUST00000076538 843 ntBASIC20.91■□□□□ 0.94
Rhbdl3P58873 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Rhbdl3P58873 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Rhbdl3P58873 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rhbdl3P58873 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rhbdl3P58873 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rhbdl3P58873 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rhbdl3P58873 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Rhbdl3P58873 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC20.9■□□□□ 0.94
Rhbdl3P58873 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC20.9■□□□□ 0.94
Rhbdl3P58873 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Rhbdl3P58873 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rhbdl3P58873 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rhbdl3P58873 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Rhbdl3P58873 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rhbdl3P58873 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rhbdl3P58873 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Rhbdl3P58873 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Rhbdl3P58873 Gm43272-201ENSMUST00000200599 1584 ntBASIC20.89■□□□□ 0.94
Rhbdl3P58873 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Rhbdl3P58873 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Rhbdl3P58873 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Rhbdl3P58873 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Rhbdl3P58873 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
Rhbdl3P58873 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rhbdl3P58873 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Rhbdl3P58873 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Rhbdl3P58873 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rhbdl3P58873 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC20.89■□□□□ 0.93
Rhbdl3P58873 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC20.89■□□□□ 0.93
Rhbdl3P58873 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rhbdl3P58873 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rhbdl3P58873 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rhbdl3P58873 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Rhbdl3P58873 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
Rhbdl3P58873 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
Rhbdl3P58873 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rhbdl3P58873 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Rhbdl3P58873 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Rhbdl3P58873 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Rhbdl3P58873 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Rhbdl3P58873 AC154471.1-201ENSMUST00000224418 436 ntBASIC20.88■□□□□ 0.93
Rhbdl3P58873 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rhbdl3P58873 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rhbdl3P58873 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rhbdl3P58873 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rhbdl3P58873 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rhbdl3P58873 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rhbdl3P58873 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Rhbdl3P58873 Gm8258-201ENSMUST00000055593 1449 ntBASIC20.87■□□□□ 0.93
Rhbdl3P58873 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rhbdl3P58873 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rhbdl3P58873 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Rhbdl3P58873 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC20.87■□□□□ 0.93
Rhbdl3P58873 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rhbdl3P58873 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rhbdl3P58873 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Rhbdl3P58873 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC20.86■□□□□ 0.93
Rhbdl3P58873 Gm7213-201ENSMUST00000215977 950 ntBASIC20.86■□□□□ 0.93
Rhbdl3P58873 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rhbdl3P58873 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Rhbdl3P58873 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Rhbdl3P58873 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC20.86■□□□□ 0.93
Rhbdl3P58873 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rhbdl3P58873 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rhbdl3P58873 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC20.85■□□□□ 0.93
Rhbdl3P58873 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rhbdl3P58873 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rhbdl3P58873 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms