Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tubgcp3P58854 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.97■□□□□ 0.47
Tubgcp3P58854 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tubgcp3P58854 Dio3-201ENSMUST00000097228 1449 ntBASIC17.97■□□□□ 0.47
Tubgcp3P58854 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.97■□□□□ 0.47
Tubgcp3P58854 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tubgcp3P58854 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tubgcp3P58854 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tubgcp3P58854 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tubgcp3P58854 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tubgcp3P58854 Gm12896-201ENSMUST00000118430 226 ntBASIC17.96■□□□□ 0.47
Tubgcp3P58854 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.96■□□□□ 0.47
Tubgcp3P58854 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.96■□□□□ 0.47
Tubgcp3P58854 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tubgcp3P58854 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Tubgcp3P58854 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tubgcp3P58854 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tubgcp3P58854 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tubgcp3P58854 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tubgcp3P58854 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tubgcp3P58854 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
Tubgcp3P58854 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.96■□□□□ 0.46
Tubgcp3P58854 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Tubgcp3P58854 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.95■□□□□ 0.46
Tubgcp3P58854 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tubgcp3P58854 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Tubgcp3P58854 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tubgcp3P58854 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tubgcp3P58854 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tubgcp3P58854 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.95■□□□□ 0.46
Tubgcp3P58854 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Tubgcp3P58854 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tubgcp3P58854 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tubgcp3P58854 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tubgcp3P58854 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Tubgcp3P58854 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Tubgcp3P58854 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tubgcp3P58854 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Tubgcp3P58854 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tubgcp3P58854 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
Tubgcp3P58854 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tubgcp3P58854 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Tubgcp3P58854 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.94■□□□□ 0.46
Tubgcp3P58854 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.94■□□□□ 0.46
Tubgcp3P58854 Gm8969-201ENSMUST00000199694 526 ntBASIC17.94■□□□□ 0.46
Tubgcp3P58854 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Tubgcp3P58854 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tubgcp3P58854 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tubgcp3P58854 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tubgcp3P58854 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.94■□□□□ 0.46
Tubgcp3P58854 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tubgcp3P58854 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tubgcp3P58854 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.94■□□□□ 0.46
Tubgcp3P58854 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tubgcp3P58854 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Tubgcp3P58854 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tubgcp3P58854 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tubgcp3P58854 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tubgcp3P58854 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tubgcp3P58854 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Tubgcp3P58854 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tubgcp3P58854 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Tubgcp3P58854 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Tubgcp3P58854 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tubgcp3P58854 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.93■□□□□ 0.46
Tubgcp3P58854 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tubgcp3P58854 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tubgcp3P58854 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
Tubgcp3P58854 Mir2861-201ENSMUST00000175539 82 ntBASIC17.93■□□□□ 0.46
Tubgcp3P58854 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tubgcp3P58854 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.93■□□□□ 0.46
Tubgcp3P58854 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tubgcp3P58854 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Tubgcp3P58854 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tubgcp3P58854 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tubgcp3P58854 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tubgcp3P58854 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tubgcp3P58854 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Tubgcp3P58854 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.92■□□□□ 0.46
Tubgcp3P58854 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tubgcp3P58854 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Tubgcp3P58854 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tubgcp3P58854 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.92■□□□□ 0.46
Tubgcp3P58854 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tubgcp3P58854 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tubgcp3P58854 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tubgcp3P58854 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tubgcp3P58854 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tubgcp3P58854 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tubgcp3P58854 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Tubgcp3P58854 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tubgcp3P58854 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tubgcp3P58854 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tubgcp3P58854 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Tubgcp3P58854 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Tubgcp3P58854 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tubgcp3P58854 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tubgcp3P58854 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tubgcp3P58854 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tubgcp3P58854 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms