Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC19.66■□□□□ 0.74
Tpm1P58771 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Tpm1P58771 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tpm1P58771 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Tpm1P58771 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Tpm1P58771 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Tpm1P58771 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Tpm1P58771 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
Tpm1P58771 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tpm1P58771 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tpm1P58771 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tpm1P58771 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tpm1P58771 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Tpm1P58771 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tpm1P58771 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.66■□□□□ 0.74
Tpm1P58771 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
Tpm1P58771 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.66■□□□□ 0.74
Tpm1P58771 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Tpm1P58771 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Tpm1P58771 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tpm1P58771 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tpm1P58771 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tpm1P58771 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tpm1P58771 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
Tpm1P58771 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tpm1P58771 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tpm1P58771 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tpm1P58771 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Tpm1P58771 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Tpm1P58771 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Tpm1P58771 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tpm1P58771 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tpm1P58771 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Tpm1P58771 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Tpm1P58771 Gm38345-201ENSMUST00000192635 1748 ntBASIC19.65■□□□□ 0.74
Tpm1P58771 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tpm1P58771 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
Tpm1P58771 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Tpm1P58771 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Tpm1P58771 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC19.64■□□□□ 0.73
Tpm1P58771 Gm13534-201ENSMUST00000121169 513 ntBASIC19.64■□□□□ 0.73
Tpm1P58771 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tpm1P58771 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tpm1P58771 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC19.64■□□□□ 0.73
Tpm1P58771 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tpm1P58771 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tpm1P58771 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tpm1P58771 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tpm1P58771 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Tpm1P58771 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tpm1P58771 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tpm1P58771 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Tpm1P58771 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tpm1P58771 Reep4-203ENSMUST00000226563 1444 ntBASIC19.63■□□□□ 0.73
Tpm1P58771 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tpm1P58771 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tpm1P58771 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Tpm1P58771 Gm22325-201ENSMUST00000158904 308 ntBASIC19.63■□□□□ 0.73
Tpm1P58771 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tpm1P58771 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tpm1P58771 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Tpm1P58771 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tpm1P58771 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Tpm1P58771 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Tpm1P58771 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tpm1P58771 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tpm1P58771 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tpm1P58771 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tpm1P58771 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Tpm1P58771 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tpm1P58771 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tpm1P58771 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tpm1P58771 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Tpm1P58771 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tpm1P58771 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.62■□□□□ 0.73
Tpm1P58771 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Tpm1P58771 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tpm1P58771 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Tpm1P58771 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tpm1P58771 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tpm1P58771 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tpm1P58771 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tpm1P58771 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tpm1P58771 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Tpm1P58771 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tpm1P58771 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tpm1P58771 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tpm1P58771 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC19.61■□□□□ 0.73
Tpm1P58771 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tpm1P58771 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tpm1P58771 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Tpm1P58771 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tpm1P58771 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Tpm1P58771 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Tpm1P58771 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tpm1P58771 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tpm1P58771 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Tpm1P58771 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tpm1P58771 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Tpm1P58771 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms