Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
Msh6P54276 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC22.39■■□□□ 1.17
Msh6P54276 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Msh6P54276 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC22.39■■□□□ 1.17
Msh6P54276 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Msh6P54276 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Msh6P54276 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
Msh6P54276 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Msh6P54276 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
Msh6P54276 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Msh6P54276 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Msh6P54276 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Msh6P54276 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC22.38■■□□□ 1.17
Msh6P54276 Mir8112-201ENSMUST00000184382 131 ntBASIC22.38■■□□□ 1.17
Msh6P54276 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Msh6P54276 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Msh6P54276 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Msh6P54276 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
Msh6P54276 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC22.38■■□□□ 1.17
Msh6P54276 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC22.38■■□□□ 1.17
Msh6P54276 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
Msh6P54276 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Msh6P54276 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Msh6P54276 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Msh6P54276 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC22.38■■□□□ 1.17
Msh6P54276 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC22.38■■□□□ 1.17
Msh6P54276 Gm7791-201ENSMUST00000219066 539 ntBASIC22.38■■□□□ 1.17
Msh6P54276 Gm7370-201ENSMUST00000219471 767 ntBASIC22.38■■□□□ 1.17
Msh6P54276 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Msh6P54276 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Msh6P54276 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Msh6P54276 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Msh6P54276 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Msh6P54276 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
Msh6P54276 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC22.37■■□□□ 1.17
Msh6P54276 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Msh6P54276 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Msh6P54276 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Msh6P54276 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Msh6P54276 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Msh6P54276 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
Msh6P54276 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Msh6P54276 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Msh6P54276 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Msh6P54276 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
Msh6P54276 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Msh6P54276 Gm13474-201ENSMUST00000122466 815 ntBASIC22.36■■□□□ 1.17
Msh6P54276 Gm5587-201ENSMUST00000206270 674 ntBASIC22.36■■□□□ 1.17
Msh6P54276 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Msh6P54276 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Msh6P54276 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Msh6P54276 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Msh6P54276 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Msh6P54276 Gm5828-201ENSMUST00000071842 1860 ntBASIC22.35■■□□□ 1.17
Msh6P54276 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
Msh6P54276 Gm5953-201ENSMUST00000220644 2616 ntBASIC22.35■■□□□ 1.17
Msh6P54276 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Msh6P54276 Gm21559-201ENSMUST00000220638 855 ntBASIC22.35■■□□□ 1.17
Msh6P54276 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
Msh6P54276 Gm8587-201ENSMUST00000076538 843 ntBASIC22.35■■□□□ 1.17
Msh6P54276 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Msh6P54276 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
Msh6P54276 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Msh6P54276 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC22.34■■□□□ 1.17
Msh6P54276 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Msh6P54276 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
Msh6P54276 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC22.34■■□□□ 1.17
Msh6P54276 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC22.34■■□□□ 1.17
Msh6P54276 Gm7638-201ENSMUST00000121348 967 ntBASIC22.34■■□□□ 1.17
Msh6P54276 Gm24841-201ENSMUST00000158676 357 ntBASIC22.34■■□□□ 1.17
Msh6P54276 Gm27704-201ENSMUST00000185094 107 ntBASIC22.34■■□□□ 1.17
Msh6P54276 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Msh6P54276 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Msh6P54276 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Msh6P54276 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Msh6P54276 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Msh6P54276 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Msh6P54276 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Msh6P54276 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
Msh6P54276 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
Msh6P54276 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC22.33■■□□□ 1.17
Msh6P54276 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC22.33■■□□□ 1.17
Msh6P54276 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Msh6P54276 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
Msh6P54276 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.16
Msh6P54276 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Msh6P54276 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.16
Msh6P54276 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
Msh6P54276 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.16
Msh6P54276 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC22.33■■□□□ 1.16
Msh6P54276 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Msh6P54276 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
Msh6P54276 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Msh6P54276 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Msh6P54276 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Msh6P54276 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Msh6P54276 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC22.32■■□□□ 1.16
Msh6P54276 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Msh6P54276 Mir1668-201ENSMUST00000184114 107 ntBASIC22.32■■□□□ 1.16
Msh6P54276 Gm28033-201ENSMUST00000184224 96 ntBASIC22.32■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms