Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Brca1P48754 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC19.83■□□□□ 0.77
Brca1P48754 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Brca1P48754 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Brca1P48754 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Brca1P48754 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Brca1P48754 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC19.83■□□□□ 0.77
Brca1P48754 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Brca1P48754 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Brca1P48754 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Brca1P48754 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.82■□□□□ 0.76
Brca1P48754 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Brca1P48754 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Brca1P48754 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC19.82■□□□□ 0.76
Brca1P48754 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Brca1P48754 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Brca1P48754 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC19.82■□□□□ 0.76
Brca1P48754 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
Brca1P48754 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC19.82■□□□□ 0.76
Brca1P48754 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Brca1P48754 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Brca1P48754 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Brca1P48754 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Brca1P48754 Cxcl14-202ENSMUST00000224801 1467 ntBASIC19.81■□□□□ 0.76
Brca1P48754 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Brca1P48754 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
Brca1P48754 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC19.81■□□□□ 0.76
Brca1P48754 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Brca1P48754 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC19.81■□□□□ 0.76
Brca1P48754 Idnk-204ENSMUST00000226010 1898 ntBASIC19.81■□□□□ 0.76
Brca1P48754 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Brca1P48754 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Brca1P48754 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.81■□□□□ 0.76
Brca1P48754 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Brca1P48754 Gm18733-201ENSMUST00000173950 856 ntBASIC19.81■□□□□ 0.76
Brca1P48754 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC19.81■□□□□ 0.76
Brca1P48754 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC19.81■□□□□ 0.76
Brca1P48754 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Brca1P48754 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Brca1P48754 Olfr129-201ENSMUST00000122318 993 ntBASIC19.8■□□□□ 0.76
Brca1P48754 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Brca1P48754 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Brca1P48754 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Brca1P48754 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Brca1P48754 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Brca1P48754 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Brca1P48754 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Brca1P48754 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Brca1P48754 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC19.79■□□□□ 0.76
Brca1P48754 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Brca1P48754 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
Brca1P48754 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Brca1P48754 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Brca1P48754 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Brca1P48754 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
Brca1P48754 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Brca1P48754 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC19.79■□□□□ 0.76
Brca1P48754 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Brca1P48754 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Brca1P48754 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
Brca1P48754 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Brca1P48754 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Brca1P48754 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Brca1P48754 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Brca1P48754 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Brca1P48754 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Brca1P48754 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Brca1P48754 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC19.78■□□□□ 0.76
Brca1P48754 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Brca1P48754 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Brca1P48754 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Brca1P48754 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.77■□□□□ 0.76
Brca1P48754 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Brca1P48754 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Brca1P48754 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Brca1P48754 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Brca1P48754 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Brca1P48754 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Brca1P48754 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Brca1P48754 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Brca1P48754 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Brca1P48754 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Brca1P48754 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Brca1P48754 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC19.76■□□□□ 0.75
Brca1P48754 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
Brca1P48754 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Brca1P48754 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Brca1P48754 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC19.76■□□□□ 0.75
Brca1P48754 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC19.76■□□□□ 0.75
Brca1P48754 Gm43073-201ENSMUST00000198200 1189 ntBASIC19.76■□□□□ 0.75
Brca1P48754 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
Brca1P48754 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Brca1P48754 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Brca1P48754 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Brca1P48754 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Brca1P48754 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Brca1P48754 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Brca1P48754 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Brca1P48754 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Brca1P48754 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms