Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rfx2P48379 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rfx2P48379 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rfx2P48379 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.42■□□□□ 0.54
Rfx2P48379 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Rfx2P48379 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.42■□□□□ 0.54
Rfx2P48379 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Rfx2P48379 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rfx2P48379 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Rfx2P48379 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC18.42■□□□□ 0.54
Rfx2P48379 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC18.42■□□□□ 0.54
Rfx2P48379 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rfx2P48379 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
Rfx2P48379 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rfx2P48379 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Rfx2P48379 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rfx2P48379 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.41■□□□□ 0.54
Rfx2P48379 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rfx2P48379 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rfx2P48379 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rfx2P48379 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rfx2P48379 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC18.41■□□□□ 0.54
Rfx2P48379 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Rfx2P48379 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Rfx2P48379 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.41■□□□□ 0.54
Rfx2P48379 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Rfx2P48379 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rfx2P48379 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Rfx2P48379 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rfx2P48379 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rfx2P48379 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Rfx2P48379 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rfx2P48379 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Rfx2P48379 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Rfx2P48379 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rfx2P48379 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Rfx2P48379 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Rfx2P48379 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rfx2P48379 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Rfx2P48379 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.4■□□□□ 0.54
Rfx2P48379 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Rfx2P48379 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.4■□□□□ 0.54
Rfx2P48379 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rfx2P48379 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
Rfx2P48379 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rfx2P48379 Gm12382-201ENSMUST00000122005 922 ntBASIC18.4■□□□□ 0.54
Rfx2P48379 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.4■□□□□ 0.54
Rfx2P48379 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rfx2P48379 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.4■□□□□ 0.54
Rfx2P48379 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.4■□□□□ 0.54
Rfx2P48379 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.4■□□□□ 0.54
Rfx2P48379 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rfx2P48379 Gm5417-201ENSMUST00000079706 384 ntBASIC18.4■□□□□ 0.54
Rfx2P48379 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rfx2P48379 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.4■□□□□ 0.54
Rfx2P48379 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rfx2P48379 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rfx2P48379 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rfx2P48379 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rfx2P48379 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rfx2P48379 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Rfx2P48379 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Rfx2P48379 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
Rfx2P48379 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rfx2P48379 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rfx2P48379 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rfx2P48379 Gm37292-201ENSMUST00000192062 758 ntBASIC18.39■□□□□ 0.53
Rfx2P48379 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rfx2P48379 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rfx2P48379 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rfx2P48379 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rfx2P48379 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Rfx2P48379 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.39■□□□□ 0.53
Rfx2P48379 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rfx2P48379 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Rfx2P48379 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rfx2P48379 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Rfx2P48379 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rfx2P48379 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rfx2P48379 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.38■□□□□ 0.53
Rfx2P48379 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Rfx2P48379 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC18.38■□□□□ 0.53
Rfx2P48379 Gm11643-201ENSMUST00000119578 864 ntBASIC18.38■□□□□ 0.53
Rfx2P48379 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.38■□□□□ 0.53
Rfx2P48379 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Rfx2P48379 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.38■□□□□ 0.53
Rfx2P48379 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.38■□□□□ 0.53
Rfx2P48379 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Rfx2P48379 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rfx2P48379 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rfx2P48379 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Rfx2P48379 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rfx2P48379 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rfx2P48379 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rfx2P48379 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.38■□□□□ 0.53
Rfx2P48379 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rfx2P48379 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Rfx2P48379 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Rfx2P48379 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.37■□□□□ 0.53
Rfx2P48379 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms