Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sdc2P43407 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Sdc2P43407 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sdc2P43407 Gm15635-204ENSMUST00000208024 2539 ntBASIC19.75■□□□□ 0.75
Sdc2P43407 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Sdc2P43407 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC19.75■□□□□ 0.75
Sdc2P43407 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sdc2P43407 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sdc2P43407 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sdc2P43407 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sdc2P43407 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sdc2P43407 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Sdc2P43407 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Sdc2P43407 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Sdc2P43407 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sdc2P43407 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
Sdc2P43407 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.74■□□□□ 0.75
Sdc2P43407 Gm27405-201ENSMUST00000184201 112 ntBASIC19.74■□□□□ 0.75
Sdc2P43407 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.74■□□□□ 0.75
Sdc2P43407 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.74■□□□□ 0.75
Sdc2P43407 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.74■□□□□ 0.75
Sdc2P43407 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.74■□□□□ 0.75
Sdc2P43407 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Sdc2P43407 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sdc2P43407 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sdc2P43407 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sdc2P43407 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sdc2P43407 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sdc2P43407 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sdc2P43407 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sdc2P43407 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sdc2P43407 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Sdc2P43407 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.73■□□□□ 0.75
Sdc2P43407 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sdc2P43407 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sdc2P43407 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sdc2P43407 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sdc2P43407 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.73■□□□□ 0.75
Sdc2P43407 Gm26524-201ENSMUST00000192339 390 ntBASIC19.73■□□□□ 0.75
Sdc2P43407 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
Sdc2P43407 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sdc2P43407 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC19.73■□□□□ 0.75
Sdc2P43407 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sdc2P43407 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Sdc2P43407 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sdc2P43407 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sdc2P43407 Gm37519-201ENSMUST00000191687 2210 ntBASIC19.72■□□□□ 0.75
Sdc2P43407 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sdc2P43407 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sdc2P43407 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sdc2P43407 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Sdc2P43407 Mir5133-201ENSMUST00000174955 77 ntBASIC19.72■□□□□ 0.75
Sdc2P43407 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Sdc2P43407 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Sdc2P43407 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sdc2P43407 AC108858.1-201ENSMUST00000228461 1498 ntBASIC19.72■□□□□ 0.75
Sdc2P43407 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sdc2P43407 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sdc2P43407 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sdc2P43407 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sdc2P43407 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sdc2P43407 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sdc2P43407 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sdc2P43407 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sdc2P43407 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sdc2P43407 Gm43294-201ENSMUST00000202850 2490 ntBASIC19.71■□□□□ 0.75
Sdc2P43407 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sdc2P43407 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sdc2P43407 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Sdc2P43407 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Sdc2P43407 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sdc2P43407 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sdc2P43407 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Sdc2P43407 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sdc2P43407 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sdc2P43407 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Sdc2P43407 Flg-201ENSMUST00000050758 1488 ntBASIC19.71■□□□□ 0.75
Sdc2P43407 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Sdc2P43407 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sdc2P43407 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sdc2P43407 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sdc2P43407 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Sdc2P43407 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sdc2P43407 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC19.71■□□□□ 0.75
Sdc2P43407 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sdc2P43407 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sdc2P43407 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC19.7■□□□□ 0.74
Sdc2P43407 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.7■□□□□ 0.74
Sdc2P43407 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sdc2P43407 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sdc2P43407 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sdc2P43407 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC19.7■□□□□ 0.74
Sdc2P43407 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Sdc2P43407 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Sdc2P43407 Rab3c-203ENSMUST00000224180 967 ntBASIC19.7■□□□□ 0.74
Sdc2P43407 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sdc2P43407 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sdc2P43407 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Sdc2P43407 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sdc2P43407 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms