Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sox6P40645 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sox6P40645 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sox6P40645 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sox6P40645 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Sox6P40645 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sox6P40645 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sox6P40645 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sox6P40645 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sox6P40645 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sox6P40645 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC16.52■□□□□ 0.24
Sox6P40645 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Sox6P40645 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Sox6P40645 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC16.52■□□□□ 0.24
Sox6P40645 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC16.52■□□□□ 0.24
Sox6P40645 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Sox6P40645 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC16.52■□□□□ 0.24
Sox6P40645 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.23
Sox6P40645 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.52■□□□□ 0.23
Sox6P40645 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.23
Sox6P40645 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Sox6P40645 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Sox6P40645 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Sox6P40645 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Sox6P40645 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Sox6P40645 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sox6P40645 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sox6P40645 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.51■□□□□ 0.23
Sox6P40645 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Sox6P40645 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sox6P40645 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Sox6P40645 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sox6P40645 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sox6P40645 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Sox6P40645 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sox6P40645 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Sox6P40645 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sox6P40645 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sox6P40645 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC16.51■□□□□ 0.23
Sox6P40645 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC16.51■□□□□ 0.23
Sox6P40645 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sox6P40645 Gm10602-201ENSMUST00000098239 609 ntBASIC16.51■□□□□ 0.23
Sox6P40645 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sox6P40645 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Sox6P40645 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sox6P40645 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sox6P40645 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Sox6P40645 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sox6P40645 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
Sox6P40645 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sox6P40645 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Sox6P40645 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sox6P40645 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.5■□□□□ 0.23
Sox6P40645 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Sox6P40645 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sox6P40645 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sox6P40645 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sox6P40645 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sox6P40645 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sox6P40645 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
Sox6P40645 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.5■□□□□ 0.23
Sox6P40645 Gm6211-202ENSMUST00000167849 925 ntBASIC16.5■□□□□ 0.23
Sox6P40645 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC16.5■□□□□ 0.23
Sox6P40645 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC16.5■□□□□ 0.23
Sox6P40645 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sox6P40645 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sox6P40645 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sox6P40645 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sox6P40645 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sox6P40645 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sox6P40645 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sox6P40645 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sox6P40645 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sox6P40645 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Sox6P40645 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sox6P40645 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sox6P40645 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sox6P40645 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Sox6P40645 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sox6P40645 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.49■□□□□ 0.23
Sox6P40645 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sox6P40645 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Sox6P40645 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sox6P40645 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sox6P40645 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sox6P40645 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sox6P40645 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sox6P40645 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sox6P40645 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sox6P40645 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Sox6P40645 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Sox6P40645 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sox6P40645 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sox6P40645 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Sox6P40645 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sox6P40645 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Sox6P40645 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sox6P40645 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Sox6P40645 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sox6P40645 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms