Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cd9P40240 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cd9P40240 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Cd9P40240 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Cd9P40240 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cd9P40240 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Cd9P40240 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.33■□□□□ 0.37
Cd9P40240 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Cd9P40240 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Cd9P40240 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.33■□□□□ 0.37
Cd9P40240 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cd9P40240 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Cd9P40240 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cd9P40240 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cd9P40240 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cd9P40240 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Cd9P40240 Gm15378-201ENSMUST00000121894 207 ntBASIC17.33■□□□□ 0.36
Cd9P40240 Gm20760-201ENSMUST00000179197 648 ntBASIC17.33■□□□□ 0.36
Cd9P40240 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.33■□□□□ 0.36
Cd9P40240 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.33■□□□□ 0.36
Cd9P40240 Gm43183-201ENSMUST00000200632 547 ntBASIC17.33■□□□□ 0.36
Cd9P40240 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.33■□□□□ 0.36
Cd9P40240 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cd9P40240 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cd9P40240 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.33■□□□□ 0.36
Cd9P40240 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Cd9P40240 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cd9P40240 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cd9P40240 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cd9P40240 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.33■□□□□ 0.36
Cd9P40240 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cd9P40240 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cd9P40240 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cd9P40240 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cd9P40240 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Cd9P40240 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Cd9P40240 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.32■□□□□ 0.36
Cd9P40240 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.32■□□□□ 0.36
Cd9P40240 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cd9P40240 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cd9P40240 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cd9P40240 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cd9P40240 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cd9P40240 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cd9P40240 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cd9P40240 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cd9P40240 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cd9P40240 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cd9P40240 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cd9P40240 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cd9P40240 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Cd9P40240 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cd9P40240 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Cd9P40240 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cd9P40240 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cd9P40240 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cd9P40240 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Cd9P40240 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cd9P40240 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cd9P40240 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.31■□□□□ 0.36
Cd9P40240 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cd9P40240 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cd9P40240 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cd9P40240 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cd9P40240 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
Cd9P40240 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Cd9P40240 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cd9P40240 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cd9P40240 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Cd9P40240 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.3■□□□□ 0.36
Cd9P40240 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cd9P40240 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cd9P40240 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cd9P40240 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cd9P40240 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cd9P40240 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.3■□□□□ 0.36
Cd9P40240 Gm10698-201ENSMUST00000182663 604 ntBASIC17.3■□□□□ 0.36
Cd9P40240 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.3■□□□□ 0.36
Cd9P40240 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.3■□□□□ 0.36
Cd9P40240 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Cd9P40240 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cd9P40240 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cd9P40240 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cd9P40240 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cd9P40240 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Cd9P40240 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cd9P40240 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cd9P40240 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cd9P40240 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cd9P40240 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.29■□□□□ 0.36
Cd9P40240 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.29■□□□□ 0.36
Cd9P40240 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cd9P40240 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.29■□□□□ 0.36
Cd9P40240 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cd9P40240 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cd9P40240 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cd9P40240 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Cd9P40240 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cd9P40240 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cd9P40240 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms