Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LdlrP35951 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LdlrP35951 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LdlrP35951 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LdlrP35951 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LdlrP35951 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LdlrP35951 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LdlrP35951 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
LdlrP35951 Gm37856-201ENSMUST00000191634 999 ntBASIC17.51■□□□□ 0.39
LdlrP35951 Gm6420-201ENSMUST00000193885 723 ntBASIC17.51■□□□□ 0.39
LdlrP35951 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LdlrP35951 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LdlrP35951 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LdlrP35951 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LdlrP35951 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
LdlrP35951 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LdlrP35951 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.51■□□□□ 0.39
LdlrP35951 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
LdlrP35951 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LdlrP35951 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LdlrP35951 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.5■□□□□ 0.39
LdlrP35951 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LdlrP35951 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LdlrP35951 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LdlrP35951 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LdlrP35951 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
LdlrP35951 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LdlrP35951 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LdlrP35951 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.5■□□□□ 0.39
LdlrP35951 Mir7071-201ENSMUST00000184847 69 ntBASIC17.5■□□□□ 0.39
LdlrP35951 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.5■□□□□ 0.39
LdlrP35951 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
LdlrP35951 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
LdlrP35951 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LdlrP35951 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LdlrP35951 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LdlrP35951 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
LdlrP35951 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
LdlrP35951 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.49■□□□□ 0.39
LdlrP35951 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
LdlrP35951 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LdlrP35951 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LdlrP35951 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
LdlrP35951 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LdlrP35951 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
LdlrP35951 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.49■□□□□ 0.39
LdlrP35951 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
LdlrP35951 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LdlrP35951 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
LdlrP35951 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
LdlrP35951 Gm10812-201ENSMUST00000099864 546 ntBASIC17.49■□□□□ 0.39
LdlrP35951 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LdlrP35951 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
LdlrP35951 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LdlrP35951 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LdlrP35951 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
LdlrP35951 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.49■□□□□ 0.39
LdlrP35951 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
LdlrP35951 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
LdlrP35951 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
LdlrP35951 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.48■□□□□ 0.39
LdlrP35951 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.48■□□□□ 0.39
LdlrP35951 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LdlrP35951 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
LdlrP35951 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LdlrP35951 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.48■□□□□ 0.39
LdlrP35951 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LdlrP35951 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LdlrP35951 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
LdlrP35951 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
LdlrP35951 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.48■□□□□ 0.39
LdlrP35951 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
LdlrP35951 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
LdlrP35951 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.47■□□□□ 0.39
LdlrP35951 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LdlrP35951 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LdlrP35951 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LdlrP35951 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LdlrP35951 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
LdlrP35951 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
LdlrP35951 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.47■□□□□ 0.39
LdlrP35951 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
LdlrP35951 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.47■□□□□ 0.39
LdlrP35951 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LdlrP35951 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.47■□□□□ 0.39
LdlrP35951 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
LdlrP35951 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LdlrP35951 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LdlrP35951 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LdlrP35951 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LdlrP35951 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
LdlrP35951 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LdlrP35951 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LdlrP35951 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LdlrP35951 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
LdlrP35951 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.46■□□□□ 0.39
LdlrP35951 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LdlrP35951 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LdlrP35951 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LdlrP35951 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms