Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.27■□□□□ 0.2
Thbs1P35441 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Thbs1P35441 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Thbs1P35441 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Thbs1P35441 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Thbs1P35441 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.26■□□□□ 0.19
Thbs1P35441 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Thbs1P35441 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Thbs1P35441 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Thbs1P35441 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Thbs1P35441 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Thbs1P35441 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC16.26■□□□□ 0.19
Thbs1P35441 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC16.26■□□□□ 0.19
Thbs1P35441 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC16.26■□□□□ 0.19
Thbs1P35441 Mtag2-201ENSMUST00000058665 714 ntBASIC16.26■□□□□ 0.19
Thbs1P35441 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC16.26■□□□□ 0.19
Thbs1P35441 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Thbs1P35441 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Thbs1P35441 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.26■□□□□ 0.19
Thbs1P35441 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Thbs1P35441 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Thbs1P35441 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.26■□□□□ 0.19
Thbs1P35441 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.25■□□□□ 0.19
Thbs1P35441 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Thbs1P35441 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Thbs1P35441 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Thbs1P35441 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Thbs1P35441 Gm11643-201ENSMUST00000119578 864 ntBASIC16.25■□□□□ 0.19
Thbs1P35441 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Thbs1P35441 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Thbs1P35441 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC16.25■□□□□ 0.19
Thbs1P35441 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Thbs1P35441 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC16.25■□□□□ 0.19
Thbs1P35441 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Thbs1P35441 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Thbs1P35441 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Thbs1P35441 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Thbs1P35441 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Thbs1P35441 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Thbs1P35441 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Thbs1P35441 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Thbs1P35441 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Thbs1P35441 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Thbs1P35441 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Thbs1P35441 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Thbs1P35441 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Thbs1P35441 Gm20760-201ENSMUST00000179197 648 ntBASIC16.24■□□□□ 0.19
Thbs1P35441 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Thbs1P35441 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Thbs1P35441 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC16.24■□□□□ 0.19
Thbs1P35441 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Thbs1P35441 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Thbs1P35441 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Thbs1P35441 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Thbs1P35441 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.24■□□□□ 0.19
Thbs1P35441 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Thbs1P35441 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Thbs1P35441 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.24■□□□□ 0.19
Thbs1P35441 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Thbs1P35441 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Thbs1P35441 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.24■□□□□ 0.19
Thbs1P35441 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
Thbs1P35441 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Thbs1P35441 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Thbs1P35441 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.23■□□□□ 0.19
Thbs1P35441 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.23■□□□□ 0.19
Thbs1P35441 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Thbs1P35441 Gm21596-201ENSMUST00000178049 1316 ntBASIC16.23■□□□□ 0.19
Thbs1P35441 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Thbs1P35441 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Thbs1P35441 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC16.23■□□□□ 0.19
Thbs1P35441 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC16.23■□□□□ 0.19
Thbs1P35441 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
Thbs1P35441 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC16.23■□□□□ 0.19
Thbs1P35441 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Thbs1P35441 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Thbs1P35441 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Thbs1P35441 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Thbs1P35441 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Thbs1P35441 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Thbs1P35441 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Thbs1P35441 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
Thbs1P35441 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Thbs1P35441 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Thbs1P35441 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Thbs1P35441 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Thbs1P35441 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Thbs1P35441 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Thbs1P35441 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Thbs1P35441 Gm12896-201ENSMUST00000118430 226 ntBASIC16.22■□□□□ 0.19
Thbs1P35441 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Thbs1P35441 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Thbs1P35441 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Thbs1P35441 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Thbs1P35441 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Thbs1P35441 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Thbs1P35441 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Thbs1P35441 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
Thbs1P35441 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Thbs1P35441 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms