Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Mmp13P33435 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Mmp13P33435 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Mmp13P33435 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Mmp13P33435 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Mmp13P33435 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
Mmp13P33435 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
Mmp13P33435 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Mmp13P33435 Gm37519-201ENSMUST00000191687 2210 ntBASIC18■□□□□ 0.47
Mmp13P33435 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Mmp13P33435 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Mmp13P33435 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Mmp13P33435 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Mmp13P33435 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Mmp13P33435 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Mmp13P33435 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Mmp13P33435 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Mmp13P33435 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18■□□□□ 0.47
Mmp13P33435 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18■□□□□ 0.47
Mmp13P33435 Gm26524-201ENSMUST00000192339 390 ntBASIC18■□□□□ 0.47
Mmp13P33435 AC122769.4-201ENSMUST00000228166 901 ntBASIC18■□□□□ 0.47
Mmp13P33435 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18■□□□□ 0.47
Mmp13P33435 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18■□□□□ 0.47
Mmp13P33435 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Mmp13P33435 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Mmp13P33435 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18■□□□□ 0.47
Mmp13P33435 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Mmp13P33435 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Mmp13P33435 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Mmp13P33435 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Mmp13P33435 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Mmp13P33435 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.99■□□□□ 0.47
Mmp13P33435 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.99■□□□□ 0.47
Mmp13P33435 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Mmp13P33435 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Mmp13P33435 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Mmp13P33435 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Mmp13P33435 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Mmp13P33435 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Mmp13P33435 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.99■□□□□ 0.47
Mmp13P33435 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Mmp13P33435 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.99■□□□□ 0.47
Mmp13P33435 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
Mmp13P33435 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Mmp13P33435 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Mmp13P33435 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Mmp13P33435 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.98■□□□□ 0.47
Mmp13P33435 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Mmp13P33435 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.98■□□□□ 0.47
Mmp13P33435 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Mmp13P33435 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Mmp13P33435 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Mmp13P33435 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Mmp13P33435 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Mmp13P33435 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Mmp13P33435 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Mmp13P33435 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Mmp13P33435 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Mmp13P33435 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Mmp13P33435 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Mmp13P33435 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Mmp13P33435 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Mmp13P33435 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.98■□□□□ 0.47
Mmp13P33435 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Mmp13P33435 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Mmp13P33435 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Mmp13P33435 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Mmp13P33435 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Mmp13P33435 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Mmp13P33435 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Mmp13P33435 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Mmp13P33435 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.97■□□□□ 0.47
Mmp13P33435 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Mmp13P33435 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
Mmp13P33435 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Mmp13P33435 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Mmp13P33435 Gm27011-201ENSMUST00000182352 972 ntBASIC17.97■□□□□ 0.47
Mmp13P33435 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Mmp13P33435 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Mmp13P33435 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Mmp13P33435 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Mmp13P33435 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Mmp13P33435 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Mmp13P33435 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Mmp13P33435 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Mmp13P33435 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.97■□□□□ 0.47
Mmp13P33435 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Mmp13P33435 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Mmp13P33435 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Mmp13P33435 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Mmp13P33435 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Mmp13P33435 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Mmp13P33435 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Mmp13P33435 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Mmp13P33435 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Mmp13P33435 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Mmp13P33435 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Mmp13P33435 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.96■□□□□ 0.47
Mmp13P33435 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.96■□□□□ 0.47
Mmp13P33435 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.96■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms