Protein–RNA interactions for Protein: P31649

Slc6a13, Sodium- and chloride-dependent GABA transporter 2, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a13P31649 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc6a13P31649 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc6a13P31649 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc6a13P31649 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Slc6a13P31649 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Slc6a13P31649 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc6a13P31649 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc6a13P31649 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc6a13P31649 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc6a13P31649 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Slc6a13P31649 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Slc6a13P31649 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Slc6a13P31649 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Slc6a13P31649 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Slc6a13P31649 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Slc6a13P31649 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Slc6a13P31649 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Slc6a13P31649 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.83■□□□□ 0.44
Slc6a13P31649 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Slc6a13P31649 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Slc6a13P31649 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Slc6a13P31649 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Slc6a13P31649 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.82■□□□□ 0.44
Slc6a13P31649 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slc6a13P31649 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Slc6a13P31649 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.82■□□□□ 0.44
Slc6a13P31649 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slc6a13P31649 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Slc6a13P31649 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.82■□□□□ 0.44
Slc6a13P31649 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slc6a13P31649 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.82■□□□□ 0.44
Slc6a13P31649 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slc6a13P31649 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Slc6a13P31649 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Slc6a13P31649 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slc6a13P31649 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.82■□□□□ 0.44
Slc6a13P31649 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slc6a13P31649 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
Slc6a13P31649 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.82■□□□□ 0.44
Slc6a13P31649 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc6a13P31649 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc6a13P31649 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc6a13P31649 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.81■□□□□ 0.44
Slc6a13P31649 Gm10517-202ENSMUST00000192970 758 ntBASIC17.81■□□□□ 0.44
Slc6a13P31649 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Slc6a13P31649 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.81■□□□□ 0.44
Slc6a13P31649 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Slc6a13P31649 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc6a13P31649 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc6a13P31649 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc6a13P31649 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc6a13P31649 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.81■□□□□ 0.44
Slc6a13P31649 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Slc6a13P31649 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc6a13P31649 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Slc6a13P31649 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc6a13P31649 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slc6a13P31649 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Slc6a13P31649 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slc6a13P31649 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Slc6a13P31649 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slc6a13P31649 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Slc6a13P31649 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slc6a13P31649 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slc6a13P31649 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slc6a13P31649 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Slc6a13P31649 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slc6a13P31649 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slc6a13P31649 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slc6a13P31649 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Slc6a13P31649 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slc6a13P31649 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slc6a13P31649 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Slc6a13P31649 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slc6a13P31649 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Slc6a13P31649 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Slc6a13P31649 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Slc6a13P31649 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slc6a13P31649 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.79■□□□□ 0.44
Slc6a13P31649 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slc6a13P31649 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slc6a13P31649 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slc6a13P31649 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slc6a13P31649 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slc6a13P31649 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slc6a13P31649 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.79■□□□□ 0.44
Slc6a13P31649 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.79■□□□□ 0.44
Slc6a13P31649 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slc6a13P31649 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Slc6a13P31649 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
Slc6a13P31649 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Slc6a13P31649 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slc6a13P31649 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slc6a13P31649 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slc6a13P31649 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slc6a13P31649 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.79■□□□□ 0.44
Slc6a13P31649 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slc6a13P31649 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slc6a13P31649 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.79■□□□□ 0.44
Slc6a13P31649 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms