Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Nfkb1P25799 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nfkb1P25799 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Nfkb1P25799 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.06■□□□□ 0.48
Nfkb1P25799 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Nfkb1P25799 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Nfkb1P25799 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Nfkb1P25799 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.06■□□□□ 0.48
Nfkb1P25799 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC18.06■□□□□ 0.48
Nfkb1P25799 Gm38027-201ENSMUST00000192315 235 ntBASIC18.06■□□□□ 0.48
Nfkb1P25799 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nfkb1P25799 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nfkb1P25799 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nfkb1P25799 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nfkb1P25799 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nfkb1P25799 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nfkb1P25799 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nfkb1P25799 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nfkb1P25799 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.05■□□□□ 0.48
Nfkb1P25799 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nfkb1P25799 Gm10418-201ENSMUST00000100943 576 ntBASIC18.05■□□□□ 0.48
Nfkb1P25799 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Nfkb1P25799 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Nfkb1P25799 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC18.05■□□□□ 0.48
Nfkb1P25799 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Nfkb1P25799 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Nfkb1P25799 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Nfkb1P25799 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nfkb1P25799 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Nfkb1P25799 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Nfkb1P25799 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nfkb1P25799 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nfkb1P25799 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nfkb1P25799 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nfkb1P25799 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nfkb1P25799 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nfkb1P25799 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nfkb1P25799 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Nfkb1P25799 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC18.04■□□□□ 0.48
Nfkb1P25799 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Nfkb1P25799 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC18.04■□□□□ 0.48
Nfkb1P25799 Gm29791-202ENSMUST00000207888 369 ntBASIC18.04■□□□□ 0.48
Nfkb1P25799 AC130671.1-201ENSMUST00000227384 1237 ntBASIC18.04■□□□□ 0.48
Nfkb1P25799 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nfkb1P25799 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Nfkb1P25799 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.04■□□□□ 0.48
Nfkb1P25799 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Nfkb1P25799 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Nfkb1P25799 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nfkb1P25799 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nfkb1P25799 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Nfkb1P25799 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nfkb1P25799 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nfkb1P25799 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nfkb1P25799 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nfkb1P25799 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Nfkb1P25799 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nfkb1P25799 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nfkb1P25799 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC18.03■□□□□ 0.48
Nfkb1P25799 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Nfkb1P25799 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Nfkb1P25799 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
Nfkb1P25799 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nfkb1P25799 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
Nfkb1P25799 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nfkb1P25799 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Nfkb1P25799 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.02■□□□□ 0.48
Nfkb1P25799 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nfkb1P25799 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC18.02■□□□□ 0.48
Nfkb1P25799 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Nfkb1P25799 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Nfkb1P25799 AC159205.6-201ENSMUST00000224935 887 ntBASIC18.02■□□□□ 0.48
Nfkb1P25799 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nfkb1P25799 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nfkb1P25799 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nfkb1P25799 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Nfkb1P25799 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Nfkb1P25799 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Nfkb1P25799 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Nfkb1P25799 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.02■□□□□ 0.47
Nfkb1P25799 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Nfkb1P25799 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Nfkb1P25799 Fst-202ENSMUST00000223640 2612 ntBASIC18.02■□□□□ 0.47
Nfkb1P25799 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nfkb1P25799 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nfkb1P25799 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.01■□□□□ 0.47
Nfkb1P25799 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nfkb1P25799 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Nfkb1P25799 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nfkb1P25799 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nfkb1P25799 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nfkb1P25799 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC18.01■□□□□ 0.47
Nfkb1P25799 Gm27463-201ENSMUST00000183569 57 ntBASIC18.01■□□□□ 0.47
Nfkb1P25799 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
Nfkb1P25799 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.01■□□□□ 0.47
Nfkb1P25799 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nfkb1P25799 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nfkb1P25799 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nfkb1P25799 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nfkb1P25799 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms