Protein–RNA interactions for Protein: P22339

Gadd45b, Growth arrest and DNA damage-inducible protein GADD45 beta, mousemouse

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gadd45bP22339 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gadd45bP22339 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Gadd45bP22339 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gadd45bP22339 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC20.28■□□□□ 0.84
Gadd45bP22339 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gadd45bP22339 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gadd45bP22339 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gadd45bP22339 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gadd45bP22339 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Gadd45bP22339 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Gadd45bP22339 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gadd45bP22339 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gadd45bP22339 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Gadd45bP22339 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gadd45bP22339 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gadd45bP22339 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Gadd45bP22339 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Gadd45bP22339 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
Gadd45bP22339 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Gadd45bP22339 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Gadd45bP22339 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC20.26■□□□□ 0.83
Gadd45bP22339 Gm28265-201ENSMUST00000188201 2319 ntBASIC20.26■□□□□ 0.83
Gadd45bP22339 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gadd45bP22339 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.26■□□□□ 0.83
Gadd45bP22339 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC20.26■□□□□ 0.83
Gadd45bP22339 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gadd45bP22339 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Gadd45bP22339 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
Gadd45bP22339 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gadd45bP22339 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Gadd45bP22339 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Gadd45bP22339 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gadd45bP22339 Cxcl14-202ENSMUST00000224801 1467 ntBASIC20.25■□□□□ 0.83
Gadd45bP22339 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gadd45bP22339 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gadd45bP22339 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Gadd45bP22339 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC20.25■□□□□ 0.83
Gadd45bP22339 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gadd45bP22339 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Gadd45bP22339 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Gadd45bP22339 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gadd45bP22339 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gadd45bP22339 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gadd45bP22339 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Gadd45bP22339 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gadd45bP22339 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gadd45bP22339 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC20.24■□□□□ 0.83
Gadd45bP22339 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Gadd45bP22339 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.24■□□□□ 0.83
Gadd45bP22339 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC20.24■□□□□ 0.83
Gadd45bP22339 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gadd45bP22339 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
Gadd45bP22339 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gadd45bP22339 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Gadd45bP22339 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gadd45bP22339 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gadd45bP22339 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gadd45bP22339 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Gadd45bP22339 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Gadd45bP22339 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gadd45bP22339 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gadd45bP22339 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gadd45bP22339 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gadd45bP22339 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gadd45bP22339 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gadd45bP22339 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gadd45bP22339 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gadd45bP22339 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gadd45bP22339 Gm26596-201ENSMUST00000180464 2655 ntBASIC20.23■□□□□ 0.83
Gadd45bP22339 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gadd45bP22339 Haglr-201ENSMUST00000100000 2085 ntBASIC20.23■□□□□ 0.83
Gadd45bP22339 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gadd45bP22339 Gm37820-201ENSMUST00000194021 2147 ntBASIC20.23■□□□□ 0.83
Gadd45bP22339 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gadd45bP22339 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gadd45bP22339 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gadd45bP22339 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gadd45bP22339 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gadd45bP22339 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gadd45bP22339 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC20.22■□□□□ 0.83
Gadd45bP22339 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gadd45bP22339 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gadd45bP22339 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gadd45bP22339 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gadd45bP22339 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gadd45bP22339 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Gadd45bP22339 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gadd45bP22339 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gadd45bP22339 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Gadd45bP22339 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.21■□□□□ 0.83
Gadd45bP22339 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gadd45bP22339 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC20.21■□□□□ 0.83
Gadd45bP22339 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gadd45bP22339 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gadd45bP22339 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gadd45bP22339 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gadd45bP22339 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Gadd45bP22339 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gadd45bP22339 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gadd45bP22339 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms