Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.83■□□□□ 0.29
BdnfP21237 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
BdnfP21237 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
BdnfP21237 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
BdnfP21237 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.83■□□□□ 0.28
BdnfP21237 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
BdnfP21237 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
BdnfP21237 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
BdnfP21237 Gm44544-201ENSMUST00000207052 1844 ntBASIC16.83■□□□□ 0.28
BdnfP21237 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
BdnfP21237 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
BdnfP21237 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
BdnfP21237 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
BdnfP21237 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
BdnfP21237 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
BdnfP21237 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
BdnfP21237 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
BdnfP21237 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BdnfP21237 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BdnfP21237 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
BdnfP21237 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC16.82■□□□□ 0.28
BdnfP21237 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BdnfP21237 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
BdnfP21237 Gm10849-201ENSMUST00000100397 618 ntBASIC16.82■□□□□ 0.28
BdnfP21237 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
BdnfP21237 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BdnfP21237 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.82■□□□□ 0.28
BdnfP21237 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
BdnfP21237 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
BdnfP21237 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BdnfP21237 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BdnfP21237 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC16.82■□□□□ 0.28
BdnfP21237 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BdnfP21237 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BdnfP21237 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BdnfP21237 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
BdnfP21237 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
BdnfP21237 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BdnfP21237 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BdnfP21237 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BdnfP21237 Gm13509-201ENSMUST00000119733 1308 ntBASIC16.81■□□□□ 0.28
BdnfP21237 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BdnfP21237 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BdnfP21237 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BdnfP21237 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
BdnfP21237 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
BdnfP21237 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
BdnfP21237 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
BdnfP21237 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BdnfP21237 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BdnfP21237 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
BdnfP21237 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
BdnfP21237 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
BdnfP21237 Gm7291-201ENSMUST00000199147 382 ntBASIC16.8■□□□□ 0.28
BdnfP21237 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BdnfP21237 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BdnfP21237 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
BdnfP21237 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BdnfP21237 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BdnfP21237 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
BdnfP21237 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BdnfP21237 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BdnfP21237 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BdnfP21237 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
BdnfP21237 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
BdnfP21237 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BdnfP21237 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BdnfP21237 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
BdnfP21237 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC16.79■□□□□ 0.28
BdnfP21237 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BdnfP21237 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC16.79■□□□□ 0.28
BdnfP21237 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC16.79■□□□□ 0.28
BdnfP21237 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BdnfP21237 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.79■□□□□ 0.28
BdnfP21237 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BdnfP21237 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
BdnfP21237 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
BdnfP21237 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.78■□□□□ 0.28
BdnfP21237 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
BdnfP21237 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BdnfP21237 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.78■□□□□ 0.28
BdnfP21237 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
BdnfP21237 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.78■□□□□ 0.28
BdnfP21237 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.78■□□□□ 0.28
BdnfP21237 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BdnfP21237 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BdnfP21237 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
BdnfP21237 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
BdnfP21237 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
BdnfP21237 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
BdnfP21237 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BdnfP21237 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.78■□□□□ 0.28
BdnfP21237 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
BdnfP21237 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
BdnfP21237 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BdnfP21237 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
BdnfP21237 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BdnfP21237 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
BdnfP21237 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
BdnfP21237 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms