Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC17.93■□□□□ 0.46
VimP20152 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VimP20152 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VimP20152 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VimP20152 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
VimP20152 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VimP20152 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
VimP20152 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
VimP20152 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.93■□□□□ 0.46
VimP20152 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VimP20152 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VimP20152 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
VimP20152 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VimP20152 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VimP20152 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
VimP20152 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC17.92■□□□□ 0.46
VimP20152 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.92■□□□□ 0.46
VimP20152 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VimP20152 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.92■□□□□ 0.46
VimP20152 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VimP20152 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VimP20152 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.92■□□□□ 0.46
VimP20152 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VimP20152 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
VimP20152 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
VimP20152 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
VimP20152 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VimP20152 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VimP20152 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VimP20152 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
VimP20152 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
VimP20152 Gm15820-201ENSMUST00000201566 728 ntBASIC17.91■□□□□ 0.46
VimP20152 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VimP20152 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VimP20152 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
VimP20152 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VimP20152 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
VimP20152 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.91■□□□□ 0.46
VimP20152 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VimP20152 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
VimP20152 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
VimP20152 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
VimP20152 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.9■□□□□ 0.46
VimP20152 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VimP20152 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
VimP20152 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VimP20152 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VimP20152 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VimP20152 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
VimP20152 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
VimP20152 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
VimP20152 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
VimP20152 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
VimP20152 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VimP20152 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VimP20152 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.9■□□□□ 0.46
VimP20152 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.9■□□□□ 0.46
VimP20152 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.9■□□□□ 0.46
VimP20152 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
VimP20152 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
VimP20152 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
VimP20152 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
VimP20152 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.9■□□□□ 0.46
VimP20152 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.9■□□□□ 0.46
VimP20152 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.9■□□□□ 0.46
VimP20152 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VimP20152 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC17.89■□□□□ 0.46
VimP20152 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
VimP20152 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
VimP20152 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VimP20152 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
VimP20152 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
VimP20152 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VimP20152 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
VimP20152 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
VimP20152 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VimP20152 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VimP20152 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
VimP20152 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VimP20152 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.88■□□□□ 0.45
VimP20152 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
VimP20152 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
VimP20152 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC17.88■□□□□ 0.45
VimP20152 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.88■□□□□ 0.45
VimP20152 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VimP20152 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
VimP20152 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.88■□□□□ 0.45
VimP20152 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VimP20152 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VimP20152 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VimP20152 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VimP20152 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
VimP20152 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VimP20152 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VimP20152 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
VimP20152 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VimP20152 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
VimP20152 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.88■□□□□ 0.45
VimP20152 Idnk-204ENSMUST00000226010 1898 ntBASIC17.88■□□□□ 0.45
VimP20152 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms