Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cxcl1P12850 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
Cxcl1P12850 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cxcl1P12850 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cxcl1P12850 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cxcl1P12850 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cxcl1P12850 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cxcl1P12850 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cxcl1P12850 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cxcl1P12850 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cxcl1P12850 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cxcl1P12850 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cxcl1P12850 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC14.6□□□□□ -0.07
Cxcl1P12850 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Cxcl1P12850 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Cxcl1P12850 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cxcl1P12850 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cxcl1P12850 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Cxcl1P12850 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Cxcl1P12850 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Cxcl1P12850 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cxcl1P12850 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cxcl1P12850 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cxcl1P12850 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC14.59□□□□□ -0.07
Cxcl1P12850 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Cxcl1P12850 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cxcl1P12850 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cxcl1P12850 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cxcl1P12850 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cxcl1P12850 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cxcl1P12850 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cxcl1P12850 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC14.59□□□□□ -0.07
Cxcl1P12850 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cxcl1P12850 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cxcl1P12850 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cxcl1P12850 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Cxcl1P12850 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cxcl1P12850 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Cxcl1P12850 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cxcl1P12850 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cxcl1P12850 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cxcl1P12850 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cxcl1P12850 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cxcl1P12850 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Cxcl1P12850 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cxcl1P12850 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cxcl1P12850 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cxcl1P12850 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cxcl1P12850 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cxcl1P12850 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cxcl1P12850 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC14.58□□□□□ -0.08
Cxcl1P12850 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Cxcl1P12850 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC14.58□□□□□ -0.08
Cxcl1P12850 Ap3s1-204ENSMUST00000225520 957 ntBASIC14.58□□□□□ -0.08
Cxcl1P12850 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cxcl1P12850 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Cxcl1P12850 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Cxcl1P12850 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cxcl1P12850 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cxcl1P12850 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Cxcl1P12850 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC14.57□□□□□ -0.08
Cxcl1P12850 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cxcl1P12850 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cxcl1P12850 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cxcl1P12850 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cxcl1P12850 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cxcl1P12850 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cxcl1P12850 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cxcl1P12850 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cxcl1P12850 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC14.57□□□□□ -0.08
Cxcl1P12850 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cxcl1P12850 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cxcl1P12850 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cxcl1P12850 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC14.57□□□□□ -0.08
Cxcl1P12850 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Cxcl1P12850 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cxcl1P12850 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cxcl1P12850 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cxcl1P12850 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Cxcl1P12850 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC14.57□□□□□ -0.08
Cxcl1P12850 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cxcl1P12850 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cxcl1P12850 Mir8112-201ENSMUST00000184382 131 ntBASIC14.56□□□□□ -0.08
Cxcl1P12850 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Cxcl1P12850 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cxcl1P12850 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cxcl1P12850 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC14.56□□□□□ -0.08
Cxcl1P12850 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cxcl1P12850 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cxcl1P12850 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cxcl1P12850 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cxcl1P12850 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cxcl1P12850 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cxcl1P12850 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cxcl1P12850 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC14.55□□□□□ -0.08
Cxcl1P12850 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cxcl1P12850 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cxcl1P12850 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cxcl1P12850 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC14.55□□□□□ -0.08
Cxcl1P12850 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms