Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Hoxc8P09025 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.83■□□□□ 0.61
Hoxc8P09025 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Hoxc8P09025 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Hoxc8P09025 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC18.83■□□□□ 0.6
Hoxc8P09025 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Hoxc8P09025 AC159205.3-201ENSMUST00000224614 874 ntBASIC18.83■□□□□ 0.6
Hoxc8P09025 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hoxc8P09025 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hoxc8P09025 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hoxc8P09025 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hoxc8P09025 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hoxc8P09025 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hoxc8P09025 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Hoxc8P09025 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hoxc8P09025 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Hoxc8P09025 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hoxc8P09025 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hoxc8P09025 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hoxc8P09025 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hoxc8P09025 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hoxc8P09025 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Hoxc8P09025 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hoxc8P09025 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hoxc8P09025 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Hoxc8P09025 Gm18958-201ENSMUST00000174258 762 ntBASIC18.82■□□□□ 0.6
Hoxc8P09025 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hoxc8P09025 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hoxc8P09025 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.82■□□□□ 0.6
Hoxc8P09025 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hoxc8P09025 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Hoxc8P09025 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Hoxc8P09025 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Hoxc8P09025 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
Hoxc8P09025 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Hoxc8P09025 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hoxc8P09025 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hoxc8P09025 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Hoxc8P09025 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hoxc8P09025 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC18.81■□□□□ 0.6
Hoxc8P09025 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Hoxc8P09025 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Hoxc8P09025 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Hoxc8P09025 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.81■□□□□ 0.6
Hoxc8P09025 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Hoxc8P09025 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hoxc8P09025 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Hoxc8P09025 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hoxc8P09025 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.8■□□□□ 0.6
Hoxc8P09025 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hoxc8P09025 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC18.8■□□□□ 0.6
Hoxc8P09025 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC18.8■□□□□ 0.6
Hoxc8P09025 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Hoxc8P09025 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hoxc8P09025 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hoxc8P09025 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.8■□□□□ 0.6
Hoxc8P09025 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hoxc8P09025 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hoxc8P09025 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hoxc8P09025 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Hoxc8P09025 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Hoxc8P09025 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hoxc8P09025 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hoxc8P09025 Gm17971-201ENSMUST00000190239 806 ntBASIC18.79■□□□□ 0.6
Hoxc8P09025 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
Hoxc8P09025 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Hoxc8P09025 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Hoxc8P09025 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Hoxc8P09025 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hoxc8P09025 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hoxc8P09025 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hoxc8P09025 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.78■□□□□ 0.6
Hoxc8P09025 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hoxc8P09025 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hoxc8P09025 Gm11860-201ENSMUST00000122346 1010 ntBASIC18.78■□□□□ 0.6
Hoxc8P09025 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC18.78■□□□□ 0.6
Hoxc8P09025 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC18.78■□□□□ 0.6
Hoxc8P09025 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC18.78■□□□□ 0.6
Hoxc8P09025 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
Hoxc8P09025 AC130713.1-201ENSMUST00000228853 1096 ntBASIC18.78■□□□□ 0.6
Hoxc8P09025 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hoxc8P09025 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hoxc8P09025 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hoxc8P09025 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hoxc8P09025 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hoxc8P09025 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hoxc8P09025 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hoxc8P09025 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hoxc8P09025 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Hoxc8P09025 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hoxc8P09025 AC154855.1-201ENSMUST00000227353 1458 ntBASIC18.77■□□□□ 0.6
Hoxc8P09025 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Hoxc8P09025 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hoxc8P09025 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Hoxc8P09025 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Hoxc8P09025 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Hoxc8P09025 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hoxc8P09025 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hoxc8P09025 Gm14464-201ENSMUST00000119658 1254 ntBASIC18.77■□□□□ 0.6
Hoxc8P09025 Gm11950-201ENSMUST00000121615 838 ntBASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms