Protein–RNA interactions for Protein: P09022

Hoxa1, Homeobox protein Hox-A1, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa1P09022 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxa1P09022 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxa1P09022 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxa1P09022 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxa1P09022 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxa1P09022 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxa1P09022 Gm18284-201ENSMUST00000172604 624 ntBASIC14.37□□□□□ -0.11
Hoxa1P09022 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC14.37□□□□□ -0.11
Hoxa1P09022 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxa1P09022 Gm13509-201ENSMUST00000119733 1308 ntBASIC14.37□□□□□ -0.11
Hoxa1P09022 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxa1P09022 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxa1P09022 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxa1P09022 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxa1P09022 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC14.37□□□□□ -0.11
Hoxa1P09022 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxa1P09022 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxa1P09022 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxa1P09022 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxa1P09022 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxa1P09022 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxa1P09022 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxa1P09022 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
Hoxa1P09022 Gm10849-201ENSMUST00000100397 618 ntBASIC14.36□□□□□ -0.11
Hoxa1P09022 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxa1P09022 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC14.36□□□□□ -0.11
Hoxa1P09022 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC14.36□□□□□ -0.11
Hoxa1P09022 Gm6365-201ENSMUST00000054711 744 ntBASIC14.36□□□□□ -0.11
Hoxa1P09022 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxa1P09022 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxa1P09022 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxa1P09022 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxa1P09022 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxa1P09022 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Hoxa1P09022 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxa1P09022 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxa1P09022 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Hoxa1P09022 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxa1P09022 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxa1P09022 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxa1P09022 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxa1P09022 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC14.35□□□□□ -0.11
Hoxa1P09022 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxa1P09022 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxa1P09022 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxa1P09022 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxa1P09022 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxa1P09022 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC14.35□□□□□ -0.11
Hoxa1P09022 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxa1P09022 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxa1P09022 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxa1P09022 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC14.35□□□□□ -0.11
Hoxa1P09022 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxa1P09022 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxa1P09022 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxa1P09022 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxa1P09022 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxa1P09022 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxa1P09022 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxa1P09022 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Hoxa1P09022 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Hoxa1P09022 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxa1P09022 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC14.34□□□□□ -0.11
Hoxa1P09022 Fcho2-208ENSMUST00000224992 2964 ntBASIC14.34□□□□□ -0.11
Hoxa1P09022 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxa1P09022 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxa1P09022 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxa1P09022 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxa1P09022 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxa1P09022 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxa1P09022 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxa1P09022 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxa1P09022 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxa1P09022 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxa1P09022 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxa1P09022 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Hoxa1P09022 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Hoxa1P09022 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hoxa1P09022 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxa1P09022 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC14.33□□□□□ -0.12
Hoxa1P09022 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Hoxa1P09022 Gm43702-201ENSMUST00000198772 2546 ntBASIC14.33□□□□□ -0.12
Hoxa1P09022 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC14.33□□□□□ -0.12
Hoxa1P09022 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Hoxa1P09022 Gm26571-201ENSMUST00000181399 666 ntBASIC14.33□□□□□ -0.12
Hoxa1P09022 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxa1P09022 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxa1P09022 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxa1P09022 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxa1P09022 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxa1P09022 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxa1P09022 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxa1P09022 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxa1P09022 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxa1P09022 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxa1P09022 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxa1P09022 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxa1P09022 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxa1P09022 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxa1P09022 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms