Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Sod1P08228 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
Sod1P08228 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.59■□□□□ 0.25
Sod1P08228 Idnk-204ENSMUST00000226010 1898 ntBASIC16.59■□□□□ 0.25
Sod1P08228 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Sod1P08228 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Sod1P08228 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Sod1P08228 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Sod1P08228 Gm11355-201ENSMUST00000121120 306 ntBASIC16.58■□□□□ 0.24
Sod1P08228 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.58■□□□□ 0.24
Sod1P08228 Mir8112-201ENSMUST00000184382 131 ntBASIC16.58■□□□□ 0.24
Sod1P08228 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Sod1P08228 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.58■□□□□ 0.24
Sod1P08228 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Sod1P08228 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC16.58■□□□□ 0.24
Sod1P08228 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.58■□□□□ 0.24
Sod1P08228 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sod1P08228 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sod1P08228 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sod1P08228 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sod1P08228 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sod1P08228 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sod1P08228 Gm35558-201ENSMUST00000222675 2219 ntBASIC16.57■□□□□ 0.24
Sod1P08228 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sod1P08228 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sod1P08228 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Sod1P08228 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sod1P08228 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC16.57■□□□□ 0.24
Sod1P08228 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC16.57■□□□□ 0.24
Sod1P08228 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Sod1P08228 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sod1P08228 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sod1P08228 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sod1P08228 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sod1P08228 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sod1P08228 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Sod1P08228 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.56■□□□□ 0.24
Sod1P08228 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sod1P08228 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Sod1P08228 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Sod1P08228 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sod1P08228 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.56■□□□□ 0.24
Sod1P08228 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Sod1P08228 Gm26039-201ENSMUST00000158152 144 ntBASIC16.56■□□□□ 0.24
Sod1P08228 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.56■□□□□ 0.24
Sod1P08228 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sod1P08228 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Sod1P08228 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sod1P08228 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sod1P08228 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sod1P08228 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sod1P08228 Fst-202ENSMUST00000223640 2612 ntBASIC16.56■□□□□ 0.24
Sod1P08228 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Sod1P08228 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sod1P08228 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Sod1P08228 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC16.56■□□□□ 0.24
Sod1P08228 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Sod1P08228 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sod1P08228 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Sod1P08228 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Sod1P08228 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
Sod1P08228 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Sod1P08228 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Sod1P08228 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC16.55■□□□□ 0.24
Sod1P08228 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.55■□□□□ 0.24
Sod1P08228 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.55■□□□□ 0.24
Sod1P08228 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC16.55■□□□□ 0.24
Sod1P08228 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.55■□□□□ 0.24
Sod1P08228 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sod1P08228 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Sod1P08228 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sod1P08228 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Sod1P08228 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sod1P08228 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sod1P08228 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Sod1P08228 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
Sod1P08228 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC16.55■□□□□ 0.24
Sod1P08228 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.55■□□□□ 0.24
Sod1P08228 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Sod1P08228 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sod1P08228 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Sod1P08228 Actl10-202ENSMUST00000226583 1501 ntBASIC16.55■□□□□ 0.24
Sod1P08228 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sod1P08228 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sod1P08228 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sod1P08228 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sod1P08228 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sod1P08228 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sod1P08228 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sod1P08228 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sod1P08228 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.54■□□□□ 0.24
Sod1P08228 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sod1P08228 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sod1P08228 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Sod1P08228 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sod1P08228 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sod1P08228 Gm17971-201ENSMUST00000190239 806 ntBASIC16.54■□□□□ 0.24
Sod1P08228 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
Sod1P08228 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Sod1P08228 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms