Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CfdP03953 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
CfdP03953 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CfdP03953 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CfdP03953 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CfdP03953 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CfdP03953 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
CfdP03953 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CfdP03953 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CfdP03953 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CfdP03953 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CfdP03953 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CfdP03953 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.05
CfdP03953 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CfdP03953 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
CfdP03953 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
CfdP03953 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
CfdP03953 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CfdP03953 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CfdP03953 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
CfdP03953 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CfdP03953 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC14.71□□□□□ -0.05
CfdP03953 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC14.71□□□□□ -0.05
CfdP03953 AC140930.3-201ENSMUST00000222935 274 ntBASIC14.71□□□□□ -0.05
CfdP03953 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CfdP03953 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CfdP03953 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
CfdP03953 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CfdP03953 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CfdP03953 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CfdP03953 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
CfdP03953 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CfdP03953 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CfdP03953 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CfdP03953 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CfdP03953 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC14.71□□□□□ -0.06
CfdP03953 Gm11841-201ENSMUST00000117060 1963 ntBASIC14.71□□□□□ -0.06
CfdP03953 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CfdP03953 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
CfdP03953 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CfdP03953 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.7□□□□□ -0.06
CfdP03953 Gm26917-202ENSMUST00000192833 3329 ntBASIC14.7□□□□□ -0.06
CfdP03953 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CfdP03953 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC14.7□□□□□ -0.06
CfdP03953 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CfdP03953 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
CfdP03953 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CfdP03953 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CfdP03953 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CfdP03953 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
CfdP03953 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
CfdP03953 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CfdP03953 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
CfdP03953 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CfdP03953 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CfdP03953 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CfdP03953 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
CfdP03953 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CfdP03953 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CfdP03953 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CfdP03953 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
CfdP03953 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CfdP03953 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CfdP03953 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CfdP03953 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CfdP03953 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CfdP03953 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CfdP03953 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC14.69□□□□□ -0.06
CfdP03953 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CfdP03953 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CfdP03953 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CfdP03953 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CfdP03953 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CfdP03953 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CfdP03953 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CfdP03953 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
CfdP03953 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CfdP03953 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CfdP03953 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CfdP03953 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC14.69□□□□□ -0.06
CfdP03953 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CfdP03953 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CfdP03953 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CfdP03953 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CfdP03953 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CfdP03953 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC14.68□□□□□ -0.06
CfdP03953 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CfdP03953 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CfdP03953 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CfdP03953 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CfdP03953 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
CfdP03953 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC14.68□□□□□ -0.06
CfdP03953 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC14.68□□□□□ -0.06
CfdP03953 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
CfdP03953 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CfdP03953 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CfdP03953 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CfdP03953 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC14.68□□□□□ -0.06
CfdP03953 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CfdP03953 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms