Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hoxa3P02831 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hoxa3P02831 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Hoxa3P02831 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hoxa3P02831 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hoxa3P02831 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC14.74□□□□□ -0.05
Hoxa3P02831 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC14.74□□□□□ -0.05
Hoxa3P02831 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC14.74□□□□□ -0.05
Hoxa3P02831 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Hoxa3P02831 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Hoxa3P02831 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC14.74□□□□□ -0.05
Hoxa3P02831 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC14.74□□□□□ -0.05
Hoxa3P02831 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hoxa3P02831 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hoxa3P02831 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hoxa3P02831 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hoxa3P02831 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hoxa3P02831 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hoxa3P02831 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hoxa3P02831 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hoxa3P02831 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hoxa3P02831 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hoxa3P02831 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hoxa3P02831 Gm38308-201ENSMUST00000194934 1809 ntBASIC14.73□□□□□ -0.05
Hoxa3P02831 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Hoxa3P02831 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hoxa3P02831 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Hoxa3P02831 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Hoxa3P02831 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hoxa3P02831 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hoxa3P02831 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hoxa3P02831 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hoxa3P02831 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hoxa3P02831 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC14.73□□□□□ -0.05
Hoxa3P02831 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Hoxa3P02831 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC14.73□□□□□ -0.05
Hoxa3P02831 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hoxa3P02831 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hoxa3P02831 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Hoxa3P02831 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hoxa3P02831 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hoxa3P02831 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hoxa3P02831 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hoxa3P02831 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Hoxa3P02831 Gm10654-201ENSMUST00000098653 1633 ntBASIC14.73□□□□□ -0.05
Hoxa3P02831 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Hoxa3P02831 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hoxa3P02831 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Hoxa3P02831 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC14.73□□□□□ -0.05
Hoxa3P02831 AC121961.1-201ENSMUST00000218594 1779 ntBASIC14.73□□□□□ -0.05
Hoxa3P02831 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hoxa3P02831 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Hoxa3P02831 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Hoxa3P02831 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Hoxa3P02831 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Hoxa3P02831 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC14.72□□□□□ -0.05
Hoxa3P02831 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Hoxa3P02831 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
Hoxa3P02831 Gm20472-201ENSMUST00000174403 1240 ntBASIC14.72□□□□□ -0.05
Hoxa3P02831 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC14.72□□□□□ -0.05
Hoxa3P02831 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Hoxa3P02831 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Hoxa3P02831 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Hoxa3P02831 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Hoxa3P02831 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Hoxa3P02831 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Hoxa3P02831 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Hoxa3P02831 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Hoxa3P02831 Gm9194-201ENSMUST00000220749 1447 ntBASIC14.72□□□□□ -0.05
Hoxa3P02831 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Hoxa3P02831 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Hoxa3P02831 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Hoxa3P02831 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC14.72□□□□□ -0.05
Hoxa3P02831 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Hoxa3P02831 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Hoxa3P02831 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Hoxa3P02831 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Hoxa3P02831 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.05
Hoxa3P02831 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Hoxa3P02831 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.05
Hoxa3P02831 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Hoxa3P02831 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Hoxa3P02831 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Hoxa3P02831 Mir2861-201ENSMUST00000175539 82 ntBASIC14.71□□□□□ -0.05
Hoxa3P02831 Mir6349-201ENSMUST00000184059 97 ntBASIC14.71□□□□□ -0.05
Hoxa3P02831 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Hoxa3P02831 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Hoxa3P02831 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC14.71□□□□□ -0.05
Hoxa3P02831 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Hoxa3P02831 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Hoxa3P02831 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Hoxa3P02831 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Hoxa3P02831 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Hoxa3P02831 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC14.71□□□□□ -0.06
Hoxa3P02831 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Hoxa3P02831 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Hoxa3P02831 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Hoxa3P02831 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hoxa3P02831 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hoxa3P02831 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms